Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YHI9YHR029C 885 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 SAE3YHR079C-A 276 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 RFU1YLR073C 603 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 LDB7YBL006C 543 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 YDL199CYDL199C 2064 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 PGM2YMR105C 1710 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 SSF1YHR066W 1362 nt4.48□□□□□ -1.69
TY1A-LR2P0CX72 RNA14YMR061W 2034 nt4.47□□□□□ -1.69
TY1A-LR2P0CX72 OTU1YFL044C 906 nt4.47□□□□□ -1.69
TY1A-LR2P0CX72 CUP2YGL166W 678 nt4.47□□□□□ -1.69
TY1A-LR2P0CX72 YBR032WYBR032W 303 nt4.47□□□□□ -1.69
TY1A-LR2P0CX72 YBR012W-AYBR012W-A 1323 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 YOR142W-AYOR142W-A 1323 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 YPR158W-AYPR158W-A 1323 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 RRP9YPR137W 1722 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 TPA1YER049W 1935 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 KAR9YPL269W 1935 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 VID22YLR373C 2706 nt4.46□□□□□ -1.69
TY1A-LR2P0CX72 NNK1YKL171W 2787 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 YJL086CYJL086C 369 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 YJR079WYJR079W 330 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 SCS22YBL091C-A 528 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 RPS9AYPL081W 594 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 SPE3YPR069C 882 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 YEH2YLR020C 1617 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 MSC2YDR205W 2175 nt4.46□□□□□ -1.7
TY1A-LR2P0CX72 SHS1YDL225W 1656 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 HRD1YOL013C 1656 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 PGS1YCL004W 1566 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 BI4Q0120 1917 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 Q0032Q0032 291 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 YDR187CYDR187C 519 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 CAX4YGR036C 720 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 PCL5YHR071W 690 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 YJL169WYJL169W 369 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 YKL068W-AYKL068W-A 237 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 MRPL38YKL170W 417 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 MCP1YOR228C 909 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 YOL153CYOL153C 1746 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 MDM36YPR083W 1740 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 HIR2YOR038C 2628 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 SWP82YFL049W 1872 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 PPQ1YPL179W 1650 nt4.45□□□□□ -1.7
TY1A-LR2P0CX72 BBC1YJL020C 3474 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 ALR2YFL050C 2577 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 YDL152WYDL152W 366 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 snR8snR8 190 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 SMB1YER029C 591 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 YGR035CYGR035C 351 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 CRG1YHR209W 876 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 MRP17YKL003C 396 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 YMR013C-AYMR013C-A 150 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 YNL184CYNL184C 327 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 YBR201C-AYBR201C-A 204 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 DPB3YBR278W 606 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 PSP1YDR505C 2526 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 KAP114YGL241W 3015 nt4.44□□□□□ -1.7
TY1A-LR2P0CX72 GSM1YJL103C 1857 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 ERG5YMR015C 1617 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 NAM2YLR382C 2685 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 PDR10YOR328W 4695 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 CRT10YOL063C 2874 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 RPS14AYCR031C 414 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 YDR340WYDR340W 303 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 YHL037CYHL037C 402 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 NBL1YHR199C-A 222 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 IRC18YJL037W 675 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 RPL43BYJR094W-A 279 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 BUD28YLR062C 378 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 RNH201YNL072W 924 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 YNL285WYNL285W 372 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 INO4YOL108C 456 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 YOR082CYOR082C 342 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 RPC40YPR110C 1008 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 PHO88YBR106W 567 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 YCL021W-AYCL021W-A 378 nt4.43□□□□□ -1.7
TY1A-LR2P0CX72 TEF1YPR080W 1377 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 TEF2YBR118W 1377 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 GLT1YDL171C 6438 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 VPS45YGL095C 1734 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 YHL026CYHL026C 948 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 NIT2YJL126W 924 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 CPS1YJL172W 1731 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 AYT1YLL063C 1425 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 PBA1YLR199C 831 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 CBF5YLR175W 1452 nt4.42□□□□□ -1.7
TY1A-LR2P0CX72 PEP7YDR323C 1548 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 MRH1YDR033W 963 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 VOA1YGR106C 798 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 YLR269CYLR269C 351 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 CIN4YMR138W 576 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 AAR2YBL074C 1068 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 OPY2YPR075C 1083 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 QCR2YPR191W 1107 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 FLC1YPL221W 2382 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 SCY1YGL083W 2415 nt4.41□□□□□ -1.7
TY1A-LR2P0CX72 KIP2YPL155C 2121 nt4.4□□□□□ -1.7
TY1A-LR2P0CX72 OSW2YLR054C 2175 nt4.4□□□□□ -1.7
TY1A-LR2P0CX72 IRC2YDR112W 309 nt4.4□□□□□ -1.71
TY1A-LR2P0CX72 PEX4YGR133W 552 nt4.4□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms