Protein–RNA interactions for Protein: P07703

RPC40, DNA-directed RNA polymerases I and III subunit RPAC1, yeastyeast

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC40P07703 snR68snR68 136 nt2.87□□□□□ -1.95
RPC40P07703 SUP56tL(CAA)A 82 nt2.87□□□□□ -1.95
RPC40P07703 SUP53tL(CAA)C 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)DtL(CAA)D 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)G1tL(CAA)G1 82 nt2.87□□□□□ -1.95
RPC40P07703 SUP54tL(CAA)G2 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)G3tL(CAA)G3 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)KtL(CAA)K 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)LtL(CAA)L 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)MtL(CAA)M 82 nt2.87□□□□□ -1.95
RPC40P07703 tL(CAA)NtL(CAA)N 82 nt2.87□□□□□ -1.95
RPC40P07703 IMP3YHR148W 552 nt2.87□□□□□ -1.95
RPC40P07703 LAC1YKL008C 1257 nt2.87□□□□□ -1.95
RPC40P07703 MCR1YKL150W 909 nt2.87□□□□□ -1.95
RPC40P07703 YKL162CYKL162C 1209 nt2.87□□□□□ -1.95
RPC40P07703 MCA1YOR197W 1299 nt2.87□□□□□ -1.95
RPC40P07703 RRD2YPL152W 1077 nt2.87□□□□□ -1.95
RPC40P07703 VHR1YIL056W 1923 nt2.87□□□□□ -1.95
RPC40P07703 TCA17YEL048C 459 nt2.86□□□□□ -1.95
RPC40P07703 YLR042CYLR042C 486 nt2.86□□□□□ -1.95
RPC40P07703 YMR075C-AYMR075C-A 366 nt2.86□□□□□ -1.95
RPC40P07703 PDR17YNL264C 1053 nt2.86□□□□□ -1.95
RPC40P07703 BUD21YOR078W 645 nt2.86□□□□□ -1.95
RPC40P07703 HUT1YPL244C 1020 nt2.86□□□□□ -1.95
RPC40P07703 SUT2YPR009W 807 nt2.86□□□□□ -1.95
RPC40P07703 CTP1YBR291C 900 nt2.86□□□□□ -1.95
RPC40P07703 RRP7YCL031C 894 nt2.86□□□□□ -1.95
RPC40P07703 SIN3YOL004W 4611 nt2.86□□□□□ -1.95
RPC40P07703 FUN30YAL019W 3396 nt2.86□□□□□ -1.95
RPC40P07703 ISW1YBR245C 3390 nt2.86□□□□□ -1.95
RPC40P07703 DUG2YBR281C 2637 nt2.85□□□□□ -1.95
RPC40P07703 YHR080CYHR080C 4038 nt2.85□□□□□ -1.95
RPC40P07703 FMN1YDR236C 657 nt2.85□□□□□ -1.95
RPC40P07703 DIG2YDR480W 972 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)DtK(UUU)D 73 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)G1tK(UUU)G1 73 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)G2tK(UUU)G2 73 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)KtK(UUU)K 73 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)LtK(UUU)L 73 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)OtK(UUU)O 73 nt2.85□□□□□ -1.95
RPC40P07703 tK(UUU)PtK(UUU)P 73 nt2.85□□□□□ -1.95
RPC40P07703 ERV1YGR029W 570 nt2.85□□□□□ -1.95
RPC40P07703 YIL102C-AYIL102C-A 228 nt2.85□□□□□ -1.95
RPC40P07703 SFH1YLR321C 1281 nt2.85□□□□□ -1.95
RPC40P07703 SUL1YBR294W 2580 nt2.85□□□□□ -1.95
RPC40P07703 AKR1YDR264C 2295 nt2.85□□□□□ -1.95
RPC40P07703 ERG20YJL167W 1059 nt2.84□□□□□ -1.95
RPC40P07703 YJL169WYJL169W 369 nt2.84□□□□□ -1.95
RPC40P07703 ECM13YBL043W 774 nt2.84□□□□□ -1.95
RPC40P07703 MRPL33YMR286W 261 nt2.84□□□□□ -1.95
RPC40P07703 FLO5YHR211W 3228 nt2.84□□□□□ -1.96
RPC40P07703 FIR1YER032W 2631 nt2.84□□□□□ -1.96
RPC40P07703 CHO2YGR157W 2610 nt2.84□□□□□ -1.96
RPC40P07703 DTD1YDL219W 453 nt2.83□□□□□ -1.96
RPC40P07703 YDR133CYDR133C 336 nt2.83□□□□□ -1.96
RPC40P07703 YGR168CYGR168C 1131 nt2.83□□□□□ -1.96
RPC40P07703 AGE2YIL044C 897 nt2.83□□□□□ -1.96
RPC40P07703 SRL3YKR091W 741 nt2.83□□□□□ -1.96
RPC40P07703 SIC1YLR079W 855 nt2.83□□□□□ -1.96
RPC40P07703 SEC14YMR079W 915 nt2.83□□□□□ -1.96
RPC40P07703 IRC14YOR135C 342 nt2.83□□□□□ -1.96
RPC40P07703 SPP381YBR152W 876 nt2.83□□□□□ -1.96
RPC40P07703 UBP14YBR058C 2346 nt2.83□□□□□ -1.96
RPC40P07703 YNL193WYNL193W 1677 nt2.82□□□□□ -1.96
RPC40P07703 RPL13AYDL082W 600 nt2.82□□□□□ -1.96
RPC40P07703 PET100YDR079W 336 nt2.82□□□□□ -1.96
RPC40P07703 CDC26YFR036W 375 nt2.82□□□□□ -1.96
RPC40P07703 YKL070WYKL070W 510 nt2.82□□□□□ -1.96
RPC40P07703 TSR4YOL022C 1227 nt2.82□□□□□ -1.96
RPC40P07703 AIM4YBR194W 372 nt2.82□□□□□ -1.96
RPC40P07703 IKI3YLR384C 4050 nt2.82□□□□□ -1.96
RPC40P07703 CDC55YGL190C 1581 nt2.82□□□□□ -1.96
RPC40P07703 DYN1YKR054C 12279 nt2.81□□□□□ -1.96
RPC40P07703 HEH2YDR458C 1992 nt2.81□□□□□ -1.96
RPC40P07703 TOP2YNL088W 4287 nt2.81□□□□□ -1.96
RPC40P07703 SDS3YIL084C 984 nt2.81□□□□□ -1.96
RPC40P07703 YAL034C-BYAL034C-B 354 nt2.81□□□□□ -1.96
RPC40P07703 PHD1YKL043W 1101 nt2.81□□□□□ -1.96
RPC40P07703 RPL6BYLR448W 531 nt2.81□□□□□ -1.96
RPC40P07703 TIF34YMR146C 1044 nt2.81□□□□□ -1.96
RPC40P07703 YOL166CYOL166C 339 nt2.81□□□□□ -1.96
RPC40P07703 PBP2YBR233W 1242 nt2.81□□□□□ -1.96
RPC40P07703 YDR061WYDR061W 1620 nt2.81□□□□□ -1.96
RPC40P07703 MDM1YML104C 3384 nt2.8□□□□□ -1.96
RPC40P07703 ECM21YBL101C 3354 nt2.8□□□□□ -1.96
RPC40P07703 ATG13YPR185W 2217 nt2.8□□□□□ -1.96
RPC40P07703 RIT1YMR283C 1542 nt2.8□□□□□ -1.96
RPC40P07703 POM152YMR129W 4014 nt2.8□□□□□ -1.96
RPC40P07703 TIM11YDR322C-A 291 nt2.8□□□□□ -1.96
RPC40P07703 MFA1YDR461W 111 nt2.8□□□□□ -1.96
RPC40P07703 YGR017WYGR017W 894 nt2.8□□□□□ -1.96
RPC40P07703 CPR7YJR032W 1182 nt2.8□□□□□ -1.96
RPC40P07703 YPL107WYPL107W 747 nt2.8□□□□□ -1.96
RPC40P07703 PMR1YGL167C 2853 nt2.8□□□□□ -1.96
RPC40P07703 TFB1YDR311W 1929 nt2.8□□□□□ -1.96
RPC40P07703 ERG11YHR007C 1593 nt2.79□□□□□ -1.96
RPC40P07703 RSR1YGR152C 819 nt2.79□□□□□ -1.96
RPC40P07703 YIR036W-AYIR036W-A 402 nt2.79□□□□□ -1.96
RPC40P07703 SDH3YKL141W 597 nt2.79□□□□□ -1.96
RPC40P07703 SDO1YLR022C 753 nt2.79□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 77.6 ms