Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC28A2O43868 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC28A2O43868 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.26■□□□□ 0.83
SLC28A2O43868 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC28A2O43868 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC28A2O43868 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
SLC28A2O43868 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC28A2O43868 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SLC28A2O43868 AC007375.3-201ENST00000600936 2314 ntBASIC20.26■□□□□ 0.83
SLC28A2O43868 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC28A2O43868 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC28A2O43868 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC28A2O43868 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC28A2O43868 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC28A2O43868 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC28A2O43868 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC28A2O43868 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC28A2O43868 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC28A2O43868 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC28A2O43868 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC28A2O43868 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC28A2O43868 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC28A2O43868 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.25■□□□□ 0.83
SLC28A2O43868 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC28A2O43868 AC083906.2-201ENST00000511578 360 ntBASIC20.25■□□□□ 0.83
SLC28A2O43868 AC010525.1-201ENST00000585559 441 ntBASIC20.25■□□□□ 0.83
SLC28A2O43868 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC28A2O43868 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC28A2O43868 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC28A2O43868 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC28A2O43868 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SLC28A2O43868 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC28A2O43868 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 TSPY6P-201ENST00000448518 926 ntBASIC20.24■□□□□ 0.83
SLC28A2O43868 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC28A2O43868 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC28A2O43868 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC28A2O43868 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC28A2O43868 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC28A2O43868 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.23■□□□□ 0.83
SLC28A2O43868 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.23■□□□□ 0.83
SLC28A2O43868 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC28A2O43868 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SLC28A2O43868 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC28A2O43868 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC28A2O43868 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC28A2O43868 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC28A2O43868 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC28A2O43868 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC28A2O43868 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SLC28A2O43868 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC28A2O43868 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC28A2O43868 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SLC28A2O43868 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SLC28A2O43868 KRT18P29-201ENST00000397031 1267 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms