Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
AP3D1O14617 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.64■□□□□ 0.73
AP3D1O14617 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3D1O14617 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3D1O14617 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 EDA-201ENST00000338901 1233 ntBASIC19.63■□□□□ 0.73
AP3D1O14617 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.63■□□□□ 0.73
AP3D1O14617 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3D1O14617 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.63■□□□□ 0.73
AP3D1O14617 IGHV3-19-201ENST00000521488 291 ntBASIC19.63■□□□□ 0.73
AP3D1O14617 AC027682.1-201ENST00000562846 899 ntBASIC19.63■□□□□ 0.73
AP3D1O14617 AF213884.3-201ENST00000563833 479 ntBASIC19.63■□□□□ 0.73
AP3D1O14617 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3D1O14617 AL031432.3-201ENST00000607698 485 ntBASIC19.63■□□□□ 0.73
AP3D1O14617 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
AP3D1O14617 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
AP3D1O14617 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3D1O14617 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.62■□□□□ 0.73
AP3D1O14617 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3D1O14617 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP3D1O14617 AP004607.7-201ENST00000527152 1677 ntBASIC19.62■□□□□ 0.73
AP3D1O14617 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3D1O14617 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP3D1O14617 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
AP3D1O14617 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3D1O14617 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
AP3D1O14617 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.62■□□□□ 0.73
AP3D1O14617 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.62■□□□□ 0.73
AP3D1O14617 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.62■□□□□ 0.73
AP3D1O14617 AL355001.2-201ENST00000620617 1191 ntBASIC19.62■□□□□ 0.73
AP3D1O14617 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
AP3D1O14617 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3D1O14617 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
AP3D1O14617 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
AP3D1O14617 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.61■□□□□ 0.73
AP3D1O14617 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3D1O14617 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3D1O14617 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
AP3D1O14617 MIR939-201ENST00000401314 82 ntBASIC19.61■□□□□ 0.73
AP3D1O14617 AL139246.5-201ENST00000606645 996 ntBASIC19.61■□□□□ 0.73
AP3D1O14617 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
AP3D1O14617 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3D1O14617 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3D1O14617 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
AP3D1O14617 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3D1O14617 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AP3D1O14617 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.61■□□□□ 0.73
AP3D1O14617 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 TSPY26P-201ENST00000476365 1326 ntBASIC19.6■□□□□ 0.73
AP3D1O14617 AL391422.3-201ENST00000603791 2761 ntBASIC19.6■□□□□ 0.73
AP3D1O14617 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.6■□□□□ 0.73
AP3D1O14617 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.6■□□□□ 0.73
AP3D1O14617 SMUG1P1-201ENST00000590640 811 ntBASIC19.6■□□□□ 0.73
AP3D1O14617 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.6■□□□□ 0.73
AP3D1O14617 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.6■□□□□ 0.73
AP3D1O14617 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.6■□□□□ 0.73
AP3D1O14617 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.6■□□□□ 0.73
AP3D1O14617 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AP3D1O14617 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
AP3D1O14617 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3D1O14617 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3D1O14617 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms