Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
DDX39AO00148 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX39AO00148 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.76■■□□□ 1.39
DDX39AO00148 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.76■■□□□ 1.39
DDX39AO00148 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 DUX4L16-201ENST00000555130 1264 ntBASIC23.76■■□□□ 1.39
DDX39AO00148 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DDX39AO00148 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
DDX39AO00148 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.76■■□□□ 1.39
DDX39AO00148 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX39AO00148 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX39AO00148 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
DDX39AO00148 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX39AO00148 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX39AO00148 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX39AO00148 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX39AO00148 MIR663A-201ENST00000385250 93 ntBASIC23.75■■□□□ 1.39
DDX39AO00148 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX39AO00148 CROCCP5-201ENST00000436658 830 ntBASIC23.75■■□□□ 1.39
DDX39AO00148 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX39AO00148 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX39AO00148 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
DDX39AO00148 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.75■■□□□ 1.39
DDX39AO00148 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX39AO00148 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.75■■□□□ 1.39
DDX39AO00148 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX39AO00148 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
DDX39AO00148 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX39AO00148 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.74■■□□□ 1.39
DDX39AO00148 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.74■■□□□ 1.39
DDX39AO00148 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.74■■□□□ 1.39
DDX39AO00148 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
DDX39AO00148 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
DDX39AO00148 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 C11orf96-202ENST00000528572 1834 ntBASIC23.74■■□□□ 1.39
DDX39AO00148 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX39AO00148 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX39AO00148 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
DDX39AO00148 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX39AO00148 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX39AO00148 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.73■■□□□ 1.39
DDX39AO00148 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
DDX39AO00148 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.73■■□□□ 1.39
DDX39AO00148 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.73■■□□□ 1.39
DDX39AO00148 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
DDX39AO00148 AC010536.3-201ENST00000620306 533 ntBASIC23.73■■□□□ 1.39
DDX39AO00148 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
DDX39AO00148 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.73■■□□□ 1.39
DDX39AO00148 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.73■■□□□ 1.39
DDX39AO00148 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX39AO00148 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX39AO00148 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
DDX39AO00148 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX39AO00148 AC006970.2-201ENST00000450065 779 ntBASIC23.72■■□□□ 1.39
DDX39AO00148 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX39AO00148 AC120498.10-201ENST00000621827 505 ntBASIC23.72■■□□□ 1.39
DDX39AO00148 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX39AO00148 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX39AO00148 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX39AO00148 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX39AO00148 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX39AO00148 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX39AO00148 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX39AO00148 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX39AO00148 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX39AO00148 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX39AO00148 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
DDX39AO00148 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.71■■□□□ 1.39
DDX39AO00148 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.71■■□□□ 1.39
DDX39AO00148 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX39AO00148 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX39AO00148 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms