Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dchs1E9PVD3 Gm44549-201ENSMUST00000208351 577 ntBASIC16.54■□□□□ 0.24
Dchs1E9PVD3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.54■□□□□ 0.24
Dchs1E9PVD3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Dchs1E9PVD3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dchs1E9PVD3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Dchs1E9PVD3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Dchs1E9PVD3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Dchs1E9PVD3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dchs1E9PVD3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.52■□□□□ 0.23
Dchs1E9PVD3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dchs1E9PVD3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Dchs1E9PVD3 Iqck-206ENSMUST00000208658 2891 ntBASIC16.52■□□□□ 0.23
Dchs1E9PVD3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Dchs1E9PVD3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm21814-202ENSMUST00000203277 873 ntBASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Dchs1E9PVD3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Gm11539-201ENSMUST00000119837 557 ntBASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Ank2-226ENSMUST00000189368 339 ntBASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Dchs1E9PVD3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Dchs1E9PVD3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms