Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.86■■■□□ 2.21
SBNO1A3KN83 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC28.86■■■□□ 2.21
SBNO1A3KN83 LSM12P1-201ENST00000411836 588 ntBASIC28.86■■■□□ 2.21
SBNO1A3KN83 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 KRT17P1-201ENST00000399211 1546 ntBASIC28.85■■■□□ 2.21
SBNO1A3KN83 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC28.85■■■□□ 2.21
SBNO1A3KN83 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC28.85■■■□□ 2.21
SBNO1A3KN83 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
SBNO1A3KN83 RNF121-214ENST00000533380 870 ntTSL 3 BASIC28.85■■■□□ 2.21
SBNO1A3KN83 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC28.85■■■□□ 2.21
SBNO1A3KN83 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
SBNO1A3KN83 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SBNO1A3KN83 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.84■■■□□ 2.21
SBNO1A3KN83 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
SBNO1A3KN83 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SBNO1A3KN83 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
SBNO1A3KN83 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC28.83■■■□□ 2.21
SBNO1A3KN83 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC28.83■■■□□ 2.21
SBNO1A3KN83 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
SBNO1A3KN83 HLA-B-256ENST00000639848 1089 ntBASIC28.83■■■□□ 2.21
SBNO1A3KN83 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SBNO1A3KN83 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
SBNO1A3KN83 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
SBNO1A3KN83 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SBNO1A3KN83 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC28.82■■■□□ 2.2
SBNO1A3KN83 NME6-213ENST00000451657 871 ntTSL 2 BASIC28.82■■■□□ 2.2
SBNO1A3KN83 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC28.82■■■□□ 2.2
SBNO1A3KN83 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC28.82■■■□□ 2.2
SBNO1A3KN83 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
SBNO1A3KN83 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SBNO1A3KN83 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SBNO1A3KN83 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
SBNO1A3KN83 AC093323.1-202ENST00000635031 2045 ntBASIC28.81■■■□□ 2.2
SBNO1A3KN83 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SBNO1A3KN83 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SBNO1A3KN83 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SBNO1A3KN83 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SBNO1A3KN83 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC28.81■■■□□ 2.2
SBNO1A3KN83 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SBNO1A3KN83 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
SBNO1A3KN83 AC087742.1-201ENST00000575880 1738 ntBASIC28.81■■■□□ 2.2
SBNO1A3KN83 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC28.8■■■□□ 2.2
SBNO1A3KN83 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC28.8■■■□□ 2.2
SBNO1A3KN83 FAM21FP-204ENST00000608637 956 ntBASIC28.8■■■□□ 2.2
SBNO1A3KN83 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.8■■■□□ 2.2
SBNO1A3KN83 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.8■■■□□ 2.2
SBNO1A3KN83 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
SBNO1A3KN83 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SBNO1A3KN83 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SBNO1A3KN83 AC061975.6-201ENST00000579045 1553 ntBASIC28.79■■■□□ 2.2
SBNO1A3KN83 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
SBNO1A3KN83 MIR718-201ENST00000390190 70 ntBASIC28.79■■■□□ 2.2
SBNO1A3KN83 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SBNO1A3KN83 MIR4497-201ENST00000583208 89 ntBASIC28.79■■■□□ 2.2
SBNO1A3KN83 AC100791.3-201ENST00000617619 330 ntBASIC28.79■■■□□ 2.2
SBNO1A3KN83 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.79■■■□□ 2.2
SBNO1A3KN83 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.78■■■□□ 2.2
SBNO1A3KN83 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SBNO1A3KN83 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SBNO1A3KN83 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SBNO1A3KN83 AC137767.1-201ENST00000602918 1920 ntBASIC28.78■■■□□ 2.2
SBNO1A3KN83 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SBNO1A3KN83 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
SBNO1A3KN83 CYP2T3P-201ENST00000601990 817 ntBASIC28.77■■■□□ 2.2
SBNO1A3KN83 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
SBNO1A3KN83 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SBNO1A3KN83 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC28.77■■■□□ 2.2
SBNO1A3KN83 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
SBNO1A3KN83 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SBNO1A3KN83 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC28.76■■■□□ 2.2
SBNO1A3KN83 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SBNO1A3KN83 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.76■■■□□ 2.2
SBNO1A3KN83 AL355472.2-201ENST00000422958 438 ntBASIC28.76■■■□□ 2.2
SBNO1A3KN83 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SBNO1A3KN83 RPPH1-201ENST00000516869 333 ntBASIC28.76■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms