Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav5-4A0A075B652 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5-4A0A075B652 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5-4A0A075B652 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav5-4A0A075B652 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav5-4A0A075B652 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5-4A0A075B652 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Gm43060-201ENSMUST00000200621 289 ntBASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav5-4A0A075B652 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5-4A0A075B652 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5-4A0A075B652 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms