Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC35.65■■■■□ 3.3
BIVM-ERCC5R4GMW8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
BIVM-ERCC5R4GMW8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
BIVM-ERCC5R4GMW8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
BIVM-ERCC5R4GMW8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
BIVM-ERCC5R4GMW8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC091799.1-201ENST00000422823 811 ntBASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.63■■■■□ 3.29
BIVM-ERCC5R4GMW8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 KRT17P1-201ENST00000399211 1546 ntBASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
BIVM-ERCC5R4GMW8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC003102.1-202ENST00000563394 1796 ntBASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 SERPINH1P1-201ENST00000419794 1249 ntBASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 AP003097.1-201ENST00000530657 1135 ntBASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
BIVM-ERCC5R4GMW8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
BIVM-ERCC5R4GMW8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
BIVM-ERCC5R4GMW8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
BIVM-ERCC5R4GMW8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC35.59■■■■□ 3.29
BIVM-ERCC5R4GMW8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC35.59■■■■□ 3.29
BIVM-ERCC5R4GMW8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 ESRRAP1-201ENST00000400596 1257 ntBASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC006058.3-201ENST00000606217 1069 ntBASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC35.58■■■■□ 3.29
BIVM-ERCC5R4GMW8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 AC008403.3-201ENST00000598924 454 ntBASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 FAM21FP-204ENST00000608637 956 ntBASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.29
BIVM-ERCC5R4GMW8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC35.57■■■■□ 3.28
BIVM-ERCC5R4GMW8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
BIVM-ERCC5R4GMW8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
BIVM-ERCC5R4GMW8 NFE2L3P1-201ENST00000588207 1959 ntBASIC35.56■■■■□ 3.28
BIVM-ERCC5R4GMW8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC35.56■■■■□ 3.28
BIVM-ERCC5R4GMW8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC35.56■■■■□ 3.28
BIVM-ERCC5R4GMW8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC35.56■■■■□ 3.28
BIVM-ERCC5R4GMW8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 OR2A1-AS1-201ENST00000462305 773 ntBASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC35.55■■■■□ 3.28
BIVM-ERCC5R4GMW8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms