Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HCFC2Q9Y5Z7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
HCFC2Q9Y5Z7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
HCFC2Q9Y5Z7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.26■■□□□ 1.15
HCFC2Q9Y5Z7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 AC026366.1-201ENST00000488803 879 ntBASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 UNC93B5-201ENST00000530315 699 ntBASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 AC087742.1-201ENST00000575880 1738 ntBASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 AC061975.6-201ENST00000579045 1553 ntBASIC22.25■■□□□ 1.15
HCFC2Q9Y5Z7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 AL596275.1-201ENST00000423464 877 ntBASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HCFC2Q9Y5Z7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 RPS2P4-201ENST00000476944 856 ntBASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HCFC2Q9Y5Z7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 LSM12P1-201ENST00000411836 588 ntBASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 AP003097.1-201ENST00000530657 1135 ntBASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HCFC2Q9Y5Z7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HCFC2Q9Y5Z7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms