Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
POLR1DQ9Y2S0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
POLR1DQ9Y2S0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 AC106739.1-201ENST00000617035 715 ntBASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
POLR1DQ9Y2S0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 AL137060.1-201ENST00000618151 2648 ntBASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
POLR1DQ9Y2S0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 EDA-201ENST00000338901 1233 ntBASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1DQ9Y2S0 Z98882.1-201ENST00000622160 2253 ntBASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 TSPY26P-201ENST00000476365 1326 ntBASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 AP001330.3-201ENST00000520123 633 ntBASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 AC110285.6-201ENST00000617652 491 ntBASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1DQ9Y2S0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 AF213884.3-201ENST00000563833 479 ntBASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 SMUG1P1-201ENST00000590640 811 ntBASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 AL355001.2-201ENST00000620617 1191 ntBASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 AC026310.3-201ENST00000625186 2373 ntBASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1DQ9Y2S0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
POLR1DQ9Y2S0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms