Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 DUX4L16-201ENST00000555130 1264 ntBASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
UBQLN1Q9UMX0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
UBQLN1Q9UMX0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 AC010536.3-201ENST00000620306 533 ntBASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 AC231657.2-201ENST00000624556 255 ntBASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 AC133561.1-201ENST00000568600 2415 ntBASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 AL117328.2-201ENST00000624617 1940 ntBASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 KRT16P2-201ENST00000414673 1423 ntBASIC22.74■■□□□ 1.23
UBQLN1Q9UMX0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBQLN1Q9UMX0 AC061975.6-201ENST00000579045 1553 ntBASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBQLN1Q9UMX0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 C11orf96-202ENST00000528572 1834 ntBASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
UBQLN1Q9UMX0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 CROCCP5-201ENST00000436658 830 ntBASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
UBQLN1Q9UMX0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
UBQLN1Q9UMX0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms