Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC092053.2-201ENST00000640557 1818 ntBASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.48■□□□□ 0.87
LRIT1Q9P2V4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 C1orf229-201ENST00000623686 2258 ntBASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 AC003102.1-202ENST00000563394 1796 ntBASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.47■□□□□ 0.87
LRIT1Q9P2V4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 AC008694.1-202ENST00000636953 945 ntBASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 AC133041.1-202ENST00000642053 222 ntBASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRIT1Q9P2V4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.45■□□□□ 0.87
LRIT1Q9P2V4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LRIT1Q9P2V4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 KRT16P2-201ENST00000414673 1423 ntBASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 AC069152.1-201ENST00000438030 544 ntBASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 KRT18P6-201ENST00000555540 1265 ntBASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRIT1Q9P2V4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 AC069236.1-201ENST00000604339 616 ntBASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 OR10C1-204ENST00000622521 1039 ntBASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 AC080038.3-201ENST00000623346 1952 ntBASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms