Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CISHQ9NSE2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CISHQ9NSE2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CISHQ9NSE2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.61■■□□□ 1.21
CISHQ9NSE2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.61■■□□□ 1.21
CISHQ9NSE2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CISHQ9NSE2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CISHQ9NSE2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.61■■□□□ 1.21
CISHQ9NSE2 AC004854.2-201ENST00000608450 1441 ntBASIC22.61■■□□□ 1.21
CISHQ9NSE2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.61■■□□□ 1.21
CISHQ9NSE2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CISHQ9NSE2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.61■■□□□ 1.21
CISHQ9NSE2 AP004607.4-201ENST00000530158 1459 ntBASIC22.6■■□□□ 1.21
CISHQ9NSE2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.6■■□□□ 1.21
CISHQ9NSE2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CISHQ9NSE2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CISHQ9NSE2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CISHQ9NSE2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CISHQ9NSE2 KRT18P61-201ENST00000585825 1298 ntBASIC22.6■■□□□ 1.21
CISHQ9NSE2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.6■■□□□ 1.21
CISHQ9NSE2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CISHQ9NSE2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CISHQ9NSE2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CISHQ9NSE2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CISHQ9NSE2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CISHQ9NSE2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CISHQ9NSE2 Z98882.1-201ENST00000622160 2253 ntBASIC22.59■■□□□ 1.21
CISHQ9NSE2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CISHQ9NSE2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CISHQ9NSE2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CISHQ9NSE2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.58■■□□□ 1.21
CISHQ9NSE2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CISHQ9NSE2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CISHQ9NSE2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CISHQ9NSE2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.58■■□□□ 1.2
CISHQ9NSE2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CISHQ9NSE2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.58■■□□□ 1.2
CISHQ9NSE2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 NTF6G-201ENST00000591094 616 ntBASIC22.57■■□□□ 1.2
CISHQ9NSE2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 AC104187.1-201ENST00000607510 612 ntBASIC22.57■■□□□ 1.2
CISHQ9NSE2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CISHQ9NSE2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CISHQ9NSE2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CISHQ9NSE2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CISHQ9NSE2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.56■■□□□ 1.2
CISHQ9NSE2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CISHQ9NSE2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.56■■□□□ 1.2
CISHQ9NSE2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CISHQ9NSE2 MIR5787-201ENST00000611784 55 ntBASIC22.56■■□□□ 1.2
CISHQ9NSE2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
CISHQ9NSE2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CISHQ9NSE2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CISHQ9NSE2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CISHQ9NSE2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.55■■□□□ 1.2
CISHQ9NSE2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CISHQ9NSE2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms