Protein–RNA interactions for Protein: Q9CXB8

Alpk1, Alpha-protein kinase 1, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alpk1Q9CXB8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Alpk1Q9CXB8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Alpk1Q9CXB8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Alpk1Q9CXB8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Alpk1Q9CXB8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Alpk1Q9CXB8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.33■■□□□ 1
Alpk1Q9CXB8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.33■■□□□ 1
Alpk1Q9CXB8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Alpk1Q9CXB8 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.32■■□□□ 1
Alpk1Q9CXB8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.32■■□□□ 1
Alpk1Q9CXB8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Alpk1Q9CXB8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Gm7977-201ENSMUST00000193787 748 ntBASIC21.31■■□□□ 1
Alpk1Q9CXB8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Alpk1Q9CXB8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Alpk1Q9CXB8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Alpk1Q9CXB8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.29■■□□□ 1
Alpk1Q9CXB8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.29■■□□□ 1
Alpk1Q9CXB8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Alpk1Q9CXB8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Alpk1Q9CXB8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.28■■□□□ 1
Alpk1Q9CXB8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.28■■□□□ 1
Alpk1Q9CXB8 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.28■■□□□ 1
Alpk1Q9CXB8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.28■■□□□ 1
Alpk1Q9CXB8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.27■■□□□ 1
Alpk1Q9CXB8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Alpk1Q9CXB8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Alpk1Q9CXB8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Alpk1Q9CXB8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.26■□□□□ 0.99
Alpk1Q9CXB8 Gm11249-201ENSMUST00000117071 859 ntBASIC21.26■□□□□ 0.99
Alpk1Q9CXB8 Gm6576-201ENSMUST00000169678 883 ntBASIC21.26■□□□□ 0.99
Alpk1Q9CXB8 Gm44549-201ENSMUST00000208351 577 ntBASIC21.26■□□□□ 0.99
Alpk1Q9CXB8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms