Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40CQ96S21 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40CQ96S21 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB40CQ96S21 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB40CQ96S21 AC068587.7-201ENST00000641602 218 ntBASIC17.1■□□□□ 0.33
RAB40CQ96S21 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.1■□□□□ 0.33
RAB40CQ96S21 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
RAB40CQ96S21 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB40CQ96S21 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB40CQ96S21 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40CQ96S21 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 BX664725.1-201ENST00000438252 379 ntBASIC17.09■□□□□ 0.33
RAB40CQ96S21 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40CQ96S21 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
RAB40CQ96S21 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB40CQ96S21 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40CQ96S21 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40CQ96S21 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40CQ96S21 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40CQ96S21 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40CQ96S21 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40CQ96S21 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40CQ96S21 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40CQ96S21 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40CQ96S21 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 AP005212.1-201ENST00000581547 1997 ntBASIC17.07■□□□□ 0.32
RAB40CQ96S21 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40CQ96S21 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
RAB40CQ96S21 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB40CQ96S21 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms