Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LRRC3BQ96PB8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.8■■□□□ 1.08
LRRC3BQ96PB8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRC3BQ96PB8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRC3BQ96PB8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 AC026471.6-201ENST00000622954 1905 ntBASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 MYC-209ENST00000641252 345 ntBASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC3BQ96PB8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 AL591742.1-201ENST00000604433 565 ntBASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC3BQ96PB8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 AC010980.2-201ENST00000587099 1412 ntBASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 AC080038.3-201ENST00000623346 1952 ntBASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC3BQ96PB8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.77■■□□□ 1.07
LRRC3BQ96PB8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 C9orf163-202ENST00000624034 2573 ntBASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 RARRES2P4-201ENST00000514074 484 ntBASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 AC243732.1-201ENST00000612648 864 ntBASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 AC092053.2-201ENST00000640557 1818 ntBASIC21.76■■□□□ 1.07
LRRC3BQ96PB8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 AL162412.1-201ENST00000567129 965 ntBASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 C1orf229-201ENST00000623686 2258 ntBASIC21.75■■□□□ 1.07
LRRC3BQ96PB8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 PRORSD1P-201ENST00000295112 541 ntBASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 ITM2C-210ENST00000620962 501 ntBASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC3BQ96PB8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms