Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.3■■□□□ 1
CFAP61Q8NHU2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.29■■□□□ 1
CFAP61Q8NHU2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CFAP61Q8NHU2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.29■■□□□ 1
CFAP61Q8NHU2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.29■■□□□ 1
CFAP61Q8NHU2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.29■■□□□ 1
CFAP61Q8NHU2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.29■■□□□ 1
CFAP61Q8NHU2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CFAP61Q8NHU2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.28■■□□□ 1
CFAP61Q8NHU2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.28■■□□□ 1
CFAP61Q8NHU2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.28■■□□□ 1
CFAP61Q8NHU2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.28■■□□□ 1
CFAP61Q8NHU2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.28■■□□□ 1
CFAP61Q8NHU2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CFAP61Q8NHU2 TSPY26P-201ENST00000476365 1326 ntBASIC21.28■■□□□ 1
CFAP61Q8NHU2 AC005229.4-201ENST00000610085 2198 ntBASIC21.27■■□□□ 1
CFAP61Q8NHU2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.27■■□□□ 1
CFAP61Q8NHU2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CFAP61Q8NHU2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.27■■□□□ 1
CFAP61Q8NHU2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.27■■□□□ 1
CFAP61Q8NHU2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
CFAP61Q8NHU2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CFAP61Q8NHU2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CFAP61Q8NHU2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 IGHV3-19-201ENST00000521488 291 ntBASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CFAP61Q8NHU2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 AC079089.2-201ENST00000531211 1277 ntBASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CFAP61Q8NHU2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 AC010542.4-201ENST00000563151 1910 ntBASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms