Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 AL138781.1-201ENST00000566567 1274 ntBASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 AC008175.2-201ENST00000612840 297 ntBASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 AC013268.1-206ENST00000638368 961 ntBASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 AC112229.1-201ENST00000639295 961 ntBASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 AC068338.2-201ENST00000563278 1430 ntBASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.29■■□□□ 1.16
TTC9BQ8N6N2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TTC9BQ8N6N2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 CYP2T1P-201ENST00000432607 1285 ntBASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 AC142086.2-201ENST00000569753 217 ntBASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TTC9BQ8N6N2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 POU5F1P4-201ENST00000413175 1085 ntBASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 AC098934.4-201ENST00000564127 592 ntBASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TTC9BQ8N6N2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 AC105036.2-201ENST00000569468 176 ntBASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 AC068473.5-201ENST00000616428 2072 ntBASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TTC9BQ8N6N2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 AF201337.1-201ENST00000520239 748 ntBASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC9BQ8N6N2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 AC133552.2-202ENST00000575694 574 ntBASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 AC120498.10-201ENST00000621827 505 ntBASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 AC233723.2-201ENST00000623798 2106 ntBASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 RBM17P2-201ENST00000616397 1405 ntBASIC22.23■■□□□ 1.15
TTC9BQ8N6N2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms