Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.31■■□□□ 1.32
NME8Q8N427 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NME8Q8N427 AC073210.2-201ENST00000430369 194 ntBASIC23.31■■□□□ 1.32
NME8Q8N427 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
NME8Q8N427 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.31■■□□□ 1.32
NME8Q8N427 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.31■■□□□ 1.32
NME8Q8N427 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.31■■□□□ 1.32
NME8Q8N427 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.31■■□□□ 1.32
NME8Q8N427 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
NME8Q8N427 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
NME8Q8N427 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
NME8Q8N427 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.31■■□□□ 1.32
NME8Q8N427 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NME8Q8N427 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NME8Q8N427 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
NME8Q8N427 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
NME8Q8N427 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NME8Q8N427 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.3■■□□□ 1.32
NME8Q8N427 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NME8Q8N427 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
NME8Q8N427 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NME8Q8N427 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
NME8Q8N427 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NME8Q8N427 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NME8Q8N427 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
NME8Q8N427 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.29■■□□□ 1.32
NME8Q8N427 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.29■■□□□ 1.32
NME8Q8N427 AL138781.1-201ENST00000566567 1274 ntBASIC23.29■■□□□ 1.32
NME8Q8N427 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
NME8Q8N427 OR10C1-204ENST00000622521 1039 ntBASIC23.29■■□□□ 1.32
NME8Q8N427 AC133041.1-202ENST00000642053 222 ntBASIC23.29■■□□□ 1.32
NME8Q8N427 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NME8Q8N427 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
NME8Q8N427 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.28■■□□□ 1.32
NME8Q8N427 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
NME8Q8N427 AL512625.2-201ENST00000417533 625 ntBASIC23.28■■□□□ 1.32
NME8Q8N427 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.28■■□□□ 1.32
NME8Q8N427 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.28■■□□□ 1.32
NME8Q8N427 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.28■■□□□ 1.32
NME8Q8N427 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NME8Q8N427 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.28■■□□□ 1.32
NME8Q8N427 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME8Q8N427 AC003102.1-202ENST00000563394 1796 ntBASIC23.27■■□□□ 1.32
NME8Q8N427 AC127496.7-201ENST00000625110 1798 ntBASIC23.27■■□□□ 1.32
NME8Q8N427 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NME8Q8N427 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.27■■□□□ 1.32
NME8Q8N427 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.27■■□□□ 1.32
NME8Q8N427 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
NME8Q8N427 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NME8Q8N427 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME8Q8N427 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NME8Q8N427 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.27■■□□□ 1.31
NME8Q8N427 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
NME8Q8N427 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.26■■□□□ 1.31
NME8Q8N427 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 CYP2T1P-201ENST00000432607 1285 ntBASIC23.26■■□□□ 1.31
NME8Q8N427 AC069152.1-201ENST00000438030 544 ntBASIC23.26■■□□□ 1.31
NME8Q8N427 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
NME8Q8N427 CD99P1-205ENST00000527459 561 ntBASIC23.26■■□□□ 1.31
NME8Q8N427 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.26■■□□□ 1.31
NME8Q8N427 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.26■■□□□ 1.31
NME8Q8N427 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.26■■□□□ 1.31
NME8Q8N427 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.26■■□□□ 1.31
NME8Q8N427 AC008694.1-202ENST00000636953 945 ntBASIC23.26■■□□□ 1.31
NME8Q8N427 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NME8Q8N427 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
NME8Q8N427 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NME8Q8N427 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
NME8Q8N427 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NME8Q8N427 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.25■■□□□ 1.31
NME8Q8N427 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms