Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
VPS8Q8N3P4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
VPS8Q8N3P4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
VPS8Q8N3P4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
VPS8Q8N3P4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
VPS8Q8N3P4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
VPS8Q8N3P4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC33.3■■■□□ 2.92
VPS8Q8N3P4 MIR663A-201ENST00000385250 93 ntBASIC33.3■■■□□ 2.92
VPS8Q8N3P4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC33.3■■■□□ 2.92
VPS8Q8N3P4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
VPS8Q8N3P4 AC008175.2-201ENST00000612840 297 ntBASIC33.3■■■□□ 2.92
VPS8Q8N3P4 AL050303.2-201ENST00000619798 666 ntBASIC33.3■■■□□ 2.92
VPS8Q8N3P4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
VPS8Q8N3P4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC33.29■■■□□ 2.92
VPS8Q8N3P4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 AC026185.1-201ENST00000445748 174 ntBASIC33.28■■■□□ 2.92
VPS8Q8N3P4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC33.28■■■□□ 2.92
VPS8Q8N3P4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
VPS8Q8N3P4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC33.26■■■□□ 2.91
VPS8Q8N3P4 AC007322.4-201ENST00000509611 723 ntBASIC33.26■■■□□ 2.91
VPS8Q8N3P4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC33.26■■■□□ 2.91
VPS8Q8N3P4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC33.26■■■□□ 2.91
VPS8Q8N3P4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 EP400NL-214ENST00000641289 2402 ntBASIC33.25■■■□□ 2.91
VPS8Q8N3P4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
VPS8Q8N3P4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
VPS8Q8N3P4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
VPS8Q8N3P4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC33.24■■■□□ 2.91
VPS8Q8N3P4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
VPS8Q8N3P4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33.24■■■□□ 2.91
VPS8Q8N3P4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
VPS8Q8N3P4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 RBM17P2-201ENST00000616397 1405 ntBASIC33.22■■■□□ 2.91
VPS8Q8N3P4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 AC231657.2-201ENST00000624556 255 ntBASIC33.22■■■□□ 2.91
VPS8Q8N3P4 AC013268.1-206ENST00000638368 961 ntBASIC33.22■■■□□ 2.91
VPS8Q8N3P4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 AC112229.1-201ENST00000639295 961 ntBASIC33.22■■■□□ 2.91
VPS8Q8N3P4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
VPS8Q8N3P4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms