Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC60Q8IWA6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 AC061975.6-201ENST00000579045 1553 ntBASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 AC007322.1-201ENST00000426983 750 ntBASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC60Q8IWA6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 POU5F1P4-201ENST00000413175 1085 ntBASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 NCF1B-203ENST00000435988 1254 ntBASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CCDC60Q8IWA6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 AC104771.1-201ENST00000603335 964 ntBASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CCDC60Q8IWA6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 AC005181.1-201ENST00000604782 1256 ntBASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CCDC60Q8IWA6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CCDC60Q8IWA6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CCDC60Q8IWA6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CCDC60Q8IWA6 AC133561.1-201ENST00000568600 2415 ntBASIC23.58■■□□□ 1.36
CCDC60Q8IWA6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 TERF1P5-201ENST00000477545 1207 ntBASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CCDC60Q8IWA6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 AC120498.10-201ENST00000621827 505 ntBASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 KRT16P2-201ENST00000414673 1423 ntBASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 ECEL1P1-201ENST00000373592 1742 ntBASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CCDC60Q8IWA6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 AC013268.1-206ENST00000638368 961 ntBASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms