Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YGR114CYGR114C 390 nt4.18□□□□□ -1.74
SSL2Q00578 CDC123YLR215C 1083 nt4.18□□□□□ -1.74
SSL2Q00578 YMR254CYMR254C 309 nt4.18□□□□□ -1.74
SSL2Q00578 CTP1YBR291C 900 nt4.18□□□□□ -1.74
SSL2Q00578 DHR2YKL078W 2208 nt4.18□□□□□ -1.74
SSL2Q00578 NGG1YDR176W 2109 nt4.18□□□□□ -1.74
SSL2Q00578 YBR225WYBR225W 2703 nt4.17□□□□□ -1.74
SSL2Q00578 RPS25AYGR027C 327 nt4.17□□□□□ -1.74
SSL2Q00578 YHI9YHR029C 885 nt4.17□□□□□ -1.74
SSL2Q00578 YPT35YHR105W 645 nt4.17□□□□□ -1.74
SSL2Q00578 YIL014C-AYIL014C-A 315 nt4.17□□□□□ -1.74
SSL2Q00578 ILM1YJR118C 612 nt4.17□□□□□ -1.74
SSL2Q00578 YPT7YML001W 627 nt4.17□□□□□ -1.74
SSL2Q00578 MED11YMR112C 396 nt4.17□□□□□ -1.74
SSL2Q00578 YPT53YNL093W 663 nt4.17□□□□□ -1.74
SSL2Q00578 ATP11YNL315C 957 nt4.17□□□□□ -1.74
SSL2Q00578 GDS1YOR355W 1569 nt4.17□□□□□ -1.74
SSL2Q00578 GRS2YPR081C 1857 nt4.17□□□□□ -1.74
SSL2Q00578 ERG5YMR015C 1617 nt4.17□□□□□ -1.74
SSL2Q00578 SPT6YGR116W 4356 nt4.16□□□□□ -1.74
SSL2Q00578 DUN1YDL101C 1542 nt4.16□□□□□ -1.74
SSL2Q00578 RSC3YDR303C 2658 nt4.16□□□□□ -1.74
SSL2Q00578 TRX3YCR083W 384 nt4.16□□□□□ -1.74
SSL2Q00578 DAD1YDR016C 285 nt4.16□□□□□ -1.74
SSL2Q00578 PEX10YDR265W 1014 nt4.16□□□□□ -1.74
SSL2Q00578 YHR213WYHR213W 597 nt4.16□□□□□ -1.74
SSL2Q00578 RPI1YIL119C 1224 nt4.16□□□□□ -1.74
SSL2Q00578 YAR062WYAR062W 597 nt4.16□□□□□ -1.74
SSL2Q00578 SYM1YLR251W 594 nt4.16□□□□□ -1.74
SSL2Q00578 YLR252WYLR252W 306 nt4.16□□□□□ -1.74
SSL2Q00578 POF1YCL047C 777 nt4.16□□□□□ -1.74
SSL2Q00578 NOG1YPL093W 1944 nt4.16□□□□□ -1.74
SSL2Q00578 YBL005W-AYBL005W-A 1323 nt4.16□□□□□ -1.74
SSL2Q00578 CHK1YBR274W 1584 nt4.15□□□□□ -1.74
SSL2Q00578 YDR491CYDR491C 492 nt4.15□□□□□ -1.75
SSL2Q00578 YAP5YIR018W 738 nt4.15□□□□□ -1.75
SSL2Q00578 SNX4YJL036W 1272 nt4.15□□□□□ -1.75
SSL2Q00578 YJL175WYJL175W 513 nt4.15□□□□□ -1.75
SSL2Q00578 FOL3YMR113W 1284 nt4.15□□□□□ -1.75
SSL2Q00578 ALG14YBR070C 714 nt4.15□□□□□ -1.75
SSL2Q00578 RPB5YBR154C 648 nt4.15□□□□□ -1.75
SSL2Q00578 KIN4YOR233W 2403 nt4.15□□□□□ -1.75
SSL2Q00578 RDS2YPL133C 1341 nt4.15□□□□□ -1.75
SSL2Q00578 TRM12YML005W 1389 nt4.14□□□□□ -1.75
SSL2Q00578 MCD4YKL165C 2760 nt4.14□□□□□ -1.75
SSL2Q00578 PRP3YDR473C 1410 nt4.14□□□□□ -1.75
SSL2Q00578 ASI1YMR119W 1875 nt4.14□□□□□ -1.75
SSL2Q00578 YDR018CYDR018C 1191 nt4.14□□□□□ -1.75
SSL2Q00578 RPC11YDR045C 333 nt4.14□□□□□ -1.75
SSL2Q00578 BSC2YDR275W 708 nt4.14□□□□□ -1.75
SSL2Q00578 THO1YER063W 657 nt4.14□□□□□ -1.75
SSL2Q00578 YIP1YGR172C 747 nt4.14□□□□□ -1.75
SSL2Q00578 YML053CYML053C 639 nt4.14□□□□□ -1.75
SSL2Q00578 RLP7YNL002C 969 nt4.14□□□□□ -1.75
SSL2Q00578 RBL2YOR265W 321 nt4.14□□□□□ -1.75
SSL2Q00578 ADF1YCL058W-A 342 nt4.14□□□□□ -1.75
SSL2Q00578 TPD3YAL016W 1908 nt4.13□□□□□ -1.75
SSL2Q00578 YGL088WYGL088W 366 nt4.13□□□□□ -1.75
SSL2Q00578 YLR428CYLR428C 345 nt4.13□□□□□ -1.75
SSL2Q00578 UBX4YMR067C 1251 nt4.13□□□□□ -1.75
SSL2Q00578 TMC1YOR052C 453 nt4.13□□□□□ -1.75
SSL2Q00578 ATX2YOR079C 942 nt4.13□□□□□ -1.75
SSL2Q00578 YOR186WYOR186W 435 nt4.13□□□□□ -1.75
SSL2Q00578 YBR090CYBR090C 369 nt4.13□□□□□ -1.75
SSL2Q00578 FYV5YCL058C 459 nt4.13□□□□□ -1.75
SSL2Q00578 AEP3YPL005W 1821 nt4.13□□□□□ -1.75
SSL2Q00578 ASM4YDL088C 1587 nt4.13□□□□□ -1.75
SSL2Q00578 BUD27YFL023W 2391 nt4.13□□□□□ -1.75
SSL2Q00578 YOL019WYOL019W 1656 nt4.13□□□□□ -1.75
SSL2Q00578 CDC45YLR103C 1953 nt4.13□□□□□ -1.75
SSL2Q00578 AIM21YIR003W 2040 nt4.12□□□□□ -1.75
SSL2Q00578 JJJ1YNL227C 1773 nt4.12□□□□□ -1.75
SSL2Q00578 RPS13YDR064W 456 nt4.12□□□□□ -1.75
SSL2Q00578 TVP15YDR100W 432 nt4.12□□□□□ -1.75
SSL2Q00578 FIN1YDR130C 876 nt4.12□□□□□ -1.75
SSL2Q00578 YIL068W-AYIL068W-A 384 nt4.12□□□□□ -1.75
SSL2Q00578 DPH1YIL103W 1278 nt4.12□□□□□ -1.75
SSL2Q00578 EAF6YJR082C 342 nt4.12□□□□□ -1.75
SSL2Q00578 YBL055CYBL055C 1257 nt4.12□□□□□ -1.75
SSL2Q00578 YBL071CYBL071C 309 nt4.12□□□□□ -1.75
SSL2Q00578 IGO1YNL157W 507 nt4.12□□□□□ -1.75
SSL2Q00578 CSM4YPL200W 471 nt4.12□□□□□ -1.75
SSL2Q00578 MRPL51YPR100W 423 nt4.12□□□□□ -1.75
SSL2Q00578 HPA2YPR193C 471 nt4.12□□□□□ -1.75
SSL2Q00578 FUN12YAL035W 3009 nt4.12□□□□□ -1.75
SSL2Q00578 KIP3YGL216W 2418 nt4.12□□□□□ -1.75
SSL2Q00578 TAF1YGR274C 3201 nt4.12□□□□□ -1.75
SSL2Q00578 MTR10YOR160W 2919 nt4.11□□□□□ -1.75
SSL2Q00578 YDL163WYDL163W 303 nt4.11□□□□□ -1.75
SSL2Q00578 YDR114CYDR114C 303 nt4.11□□□□□ -1.75
SSL2Q00578 QCR10YHR001W-A 234 nt4.11□□□□□ -1.75
SSL2Q00578 CIC1YHR052W 1131 nt4.11□□□□□ -1.75
SSL2Q00578 GRX7YBR014C 612 nt4.11□□□□□ -1.75
SSL2Q00578 FRM2YCL026C-A 582 nt4.11□□□□□ -1.75
SSL2Q00578 YOR192C-AYOR192C-A 1317 nt4.11□□□□□ -1.75
SSL2Q00578 YOR343W-AYOR343W-A 1317 nt4.11□□□□□ -1.75
SSL2Q00578 POL1YNL102W 4407 nt4.11□□□□□ -1.75
SSL2Q00578 SPT16YGL207W 3108 nt4.11□□□□□ -1.75
SSL2Q00578 CAF130YGR134W 3369 nt4.11□□□□□ -1.75
SSL2Q00578 AI4Q0065 1671 nt4.1□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms