Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 POU5F1P4-201ENST00000413175 1085 ntBASIC18.95■□□□□ 0.62
CLDN18P56856 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN18P56856 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN18P56856 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN18P56856 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN18P56856 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN18P56856 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN18P56856 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN18P56856 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN18P56856 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN18P56856 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLDN18P56856 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN18P56856 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN18P56856 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN18P56856 DUX4L16-201ENST00000555130 1264 ntBASIC18.94■□□□□ 0.62
CLDN18P56856 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLDN18P56856 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN18P56856 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN18P56856 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN18P56856 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN18P56856 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN18P56856 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN18P56856 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLDN18P56856 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN18P56856 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CLDN18P56856 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 AL117328.2-201ENST00000624617 1940 ntBASIC18.92■□□□□ 0.62
CLDN18P56856 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN18P56856 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN18P56856 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CLDN18P56856 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN18P56856 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.92■□□□□ 0.62
CLDN18P56856 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.92■□□□□ 0.62
CLDN18P56856 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN18P56856 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.92■□□□□ 0.62
CLDN18P56856 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN18P56856 AC010536.3-201ENST00000620306 533 ntBASIC18.92■□□□□ 0.62
CLDN18P56856 AC120498.10-201ENST00000621827 505 ntBASIC18.92■□□□□ 0.62
CLDN18P56856 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN18P56856 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN18P56856 AC061975.6-201ENST00000579045 1553 ntBASIC18.92■□□□□ 0.62
CLDN18P56856 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN18P56856 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN18P56856 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 CROCCP5-201ENST00000436658 830 ntBASIC18.91■□□□□ 0.62
CLDN18P56856 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN18P56856 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLDN18P56856 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.91■□□□□ 0.62
CLDN18P56856 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN18P56856 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
CLDN18P56856 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CLDN18P56856 KRT16P2-201ENST00000414673 1423 ntBASIC18.91■□□□□ 0.62
CLDN18P56856 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN18P56856 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN18P56856 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN18P56856 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CLDN18P56856 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN18P56856 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN18P56856 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN18P56856 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.9■□□□□ 0.62
CLDN18P56856 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN18P56856 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLDN18P56856 AC231657.2-201ENST00000624556 255 ntBASIC18.9■□□□□ 0.62
CLDN18P56856 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN18P56856 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms