Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LHX2P50458 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.96■□□□□ 0.63
LHX2P50458 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LHX2P50458 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX2P50458 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX2P50458 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX2P50458 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX2P50458 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.95■□□□□ 0.62
LHX2P50458 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX2P50458 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.95■□□□□ 0.62
LHX2P50458 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LHX2P50458 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX2P50458 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX2P50458 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
LHX2P50458 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.95■□□□□ 0.62
LHX2P50458 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LHX2P50458 AC120498.10-201ENST00000621827 505 ntBASIC18.95■□□□□ 0.62
LHX2P50458 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LHX2P50458 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LHX2P50458 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX2P50458 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX2P50458 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
LHX2P50458 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.95■□□□□ 0.62
LHX2P50458 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LHX2P50458 AL117328.2-201ENST00000624617 1940 ntBASIC18.94■□□□□ 0.62
LHX2P50458 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX2P50458 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX2P50458 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX2P50458 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX2P50458 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LHX2P50458 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.94■□□□□ 0.62
LHX2P50458 AC010536.3-201ENST00000620306 533 ntBASIC18.94■□□□□ 0.62
LHX2P50458 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.94■□□□□ 0.62
LHX2P50458 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX2P50458 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LHX2P50458 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LHX2P50458 AC061975.6-201ENST00000579045 1553 ntBASIC18.93■□□□□ 0.62
LHX2P50458 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LHX2P50458 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.93■□□□□ 0.62
LHX2P50458 AC231657.2-201ENST00000624556 255 ntBASIC18.93■□□□□ 0.62
LHX2P50458 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LHX2P50458 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 KRT16P2-201ENST00000414673 1423 ntBASIC18.92■□□□□ 0.62
LHX2P50458 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.92■□□□□ 0.62
LHX2P50458 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX2P50458 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX2P50458 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LHX2P50458 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX2P50458 CROCCP5-201ENST00000436658 830 ntBASIC18.92■□□□□ 0.62
LHX2P50458 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.92■□□□□ 0.62
LHX2P50458 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.92■□□□□ 0.62
LHX2P50458 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.92■□□□□ 0.62
LHX2P50458 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.92■□□□□ 0.62
LHX2P50458 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LHX2P50458 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LHX2P50458 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.92■□□□□ 0.62
LHX2P50458 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LHX2P50458 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LHX2P50458 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LHX2P50458 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 C11orf96-202ENST00000528572 1834 ntBASIC18.91■□□□□ 0.62
LHX2P50458 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX2P50458 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX2P50458 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.91■□□□□ 0.62
LHX2P50458 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LHX2P50458 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX2P50458 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.91■□□□□ 0.62
LHX2P50458 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.91■□□□□ 0.62
LHX2P50458 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms