Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRIM2P49643 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRIM2P49643 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRIM2P49643 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRIM2P49643 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRIM2P49643 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRIM2P49643 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.04■□□□□ 0.8
PRIM2P49643 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PRIM2P49643 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRIM2P49643 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRIM2P49643 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRIM2P49643 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.04■□□□□ 0.8
PRIM2P49643 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRIM2P49643 EDA-201ENST00000338901 1233 ntBASIC20.04■□□□□ 0.8
PRIM2P49643 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.04■□□□□ 0.8
PRIM2P49643 AC027682.1-201ENST00000562846 899 ntBASIC20.04■□□□□ 0.8
PRIM2P49643 AC008764.7-201ENST00000593779 1081 ntBASIC20.04■□□□□ 0.8
PRIM2P49643 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRIM2P49643 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRIM2P49643 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.04■□□□□ 0.8
PRIM2P49643 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRIM2P49643 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
PRIM2P49643 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PRIM2P49643 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRIM2P49643 IGHV3-19-201ENST00000521488 291 ntBASIC20.03■□□□□ 0.8
PRIM2P49643 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
PRIM2P49643 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.03■□□□□ 0.8
PRIM2P49643 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.03■□□□□ 0.8
PRIM2P49643 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRIM2P49643 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.02■□□□□ 0.8
PRIM2P49643 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRIM2P49643 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.02■□□□□ 0.8
PRIM2P49643 AC099791.1-201ENST00000416440 715 ntBASIC20.02■□□□□ 0.8
PRIM2P49643 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.02■□□□□ 0.8
PRIM2P49643 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.02■□□□□ 0.8
PRIM2P49643 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRIM2P49643 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRIM2P49643 FEM1AP4-201ENST00000443167 1987 ntBASIC20.02■□□□□ 0.8
PRIM2P49643 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRIM2P49643 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRIM2P49643 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRIM2P49643 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PRIM2P49643 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRIM2P49643 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRIM2P49643 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRIM2P49643 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.01■□□□□ 0.79
PRIM2P49643 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.01■□□□□ 0.79
PRIM2P49643 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRIM2P49643 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRIM2P49643 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.01■□□□□ 0.79
PRIM2P49643 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.01■□□□□ 0.79
PRIM2P49643 AC133561.4-201ENST00000566112 224 ntBASIC20.01■□□□□ 0.79
PRIM2P49643 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PRIM2P49643 AL355001.2-201ENST00000620617 1191 ntBASIC20.01■□□□□ 0.79
PRIM2P49643 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.01■□□□□ 0.79
PRIM2P49643 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRIM2P49643 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRIM2P49643 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.01■□□□□ 0.79
PRIM2P49643 AP004607.7-201ENST00000527152 1677 ntBASIC20■□□□□ 0.79
PRIM2P49643 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20■□□□□ 0.79
PRIM2P49643 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 GRAMD4P2-201ENST00000423297 1097 ntBASIC20■□□□□ 0.79
PRIM2P49643 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20■□□□□ 0.79
PRIM2P49643 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20■□□□□ 0.79
PRIM2P49643 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PRIM2P49643 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20■□□□□ 0.79
PRIM2P49643 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PRIM2P49643 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20■□□□□ 0.79
PRIM2P49643 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20■□□□□ 0.79
PRIM2P49643 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20■□□□□ 0.79
PRIM2P49643 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRIM2P49643 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.99■□□□□ 0.79
PRIM2P49643 AF106564.1-201ENST00000607058 2553 ntBASIC19.99■□□□□ 0.79
PRIM2P49643 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.99■□□□□ 0.79
PRIM2P49643 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.99■□□□□ 0.79
PRIM2P49643 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.99■□□□□ 0.79
PRIM2P49643 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PRIM2P49643 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PRIM2P49643 AP001330.3-201ENST00000520123 633 ntBASIC19.99■□□□□ 0.79
PRIM2P49643 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.99■□□□□ 0.79
PRIM2P49643 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.99■□□□□ 0.79
PRIM2P49643 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.99■□□□□ 0.79
PRIM2P49643 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PRIM2P49643 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms