Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 TSC13YDL015C 933 nt4.03□□□□□ -1.76
TDP1P38319 snR9snR9 187 nt4.03□□□□□ -1.76
TDP1P38319 IES5YER092W 378 nt4.03□□□□□ -1.76
TDP1P38319 YMR052C-AYMR052C-A 366 nt4.03□□□□□ -1.76
TDP1P38319 YNL057WYNL057W 333 nt4.03□□□□□ -1.76
TDP1P38319 TOM22YNL131W 459 nt4.03□□□□□ -1.76
TDP1P38319 TRM112YNR046W 408 nt4.03□□□□□ -1.76
TDP1P38319 ARP4YJL081C 1470 nt4.03□□□□□ -1.76
TDP1P38319 MTR10YOR160W 2919 nt4.03□□□□□ -1.76
TDP1P38319 DPB4YDR121W 591 nt4.02□□□□□ -1.77
TDP1P38319 YDR355CYDR355C 303 nt4.02□□□□□ -1.77
TDP1P38319 SLX9YGR081C 633 nt4.02□□□□□ -1.77
TDP1P38319 YHI9YHR029C 885 nt4.02□□□□□ -1.77
TDP1P38319 LRP1YHR081W 555 nt4.02□□□□□ -1.77
TDP1P38319 YIL029CYIL029C 429 nt4.02□□□□□ -1.77
TDP1P38319 ASG7YJL170C 630 nt4.02□□□□□ -1.77
TDP1P38319 YLR101CYLR101C 396 nt4.02□□□□□ -1.77
TDP1P38319 HRI1YLR301W 735 nt4.02□□□□□ -1.77
TDP1P38319 SWM2YNR004W 441 nt4.02□□□□□ -1.77
TDP1P38319 ADF1YCL058W-A 342 nt4.02□□□□□ -1.77
TDP1P38319 MNR2YKL064W 2910 nt4.01□□□□□ -1.77
TDP1P38319 RTC1YOL138C 4026 nt4.01□□□□□ -1.77
TDP1P38319 PHR1YOR386W 1698 nt4.01□□□□□ -1.77
TDP1P38319 GCR1YPL075W 2358 nt4.01□□□□□ -1.77
TDP1P38319 snR5snR5 204 nt4.01□□□□□ -1.77
TDP1P38319 BSC2YDR275W 708 nt4.01□□□□□ -1.77
TDP1P38319 SPR6YER115C 576 nt4.01□□□□□ -1.77
TDP1P38319 SPI1YER150W 447 nt4.01□□□□□ -1.77
TDP1P38319 RSM25YIL093C 795 nt4.01□□□□□ -1.77
TDP1P38319 YJR037WYJR037W 384 nt4.01□□□□□ -1.77
TDP1P38319 RPL17AYKL180W 555 nt4.01□□□□□ -1.77
TDP1P38319 SEC22YLR268W 645 nt4.01□□□□□ -1.77
TDP1P38319 AVT5YBL089W 1380 nt4.01□□□□□ -1.77
TDP1P38319 MNN4YKL201C 3537 nt4□□□□□ -1.77
TDP1P38319 RAD54YGL163C 2697 nt4□□□□□ -1.77
TDP1P38319 RPB2YOR151C 3675 nt4□□□□□ -1.77
TDP1P38319 MSS4YDR208W 2340 nt4□□□□□ -1.77
TDP1P38319 YDR170W-AYDR170W-A 1323 nt4□□□□□ -1.77
TDP1P38319 YNL284C-AYNL284C-A 1323 nt4□□□□□ -1.77
TDP1P38319 RPP1AYDL081C 321 nt4□□□□□ -1.77
TDP1P38319 YDR491CYDR491C 492 nt4□□□□□ -1.77
TDP1P38319 YER181CYER181C 324 nt4□□□□□ -1.77
TDP1P38319 RPL16AYIL133C 600 nt4□□□□□ -1.77
TDP1P38319 YNK1YKL067W 462 nt4□□□□□ -1.77
TDP1P38319 FMP46YKR049C 402 nt4□□□□□ -1.77
TDP1P38319 BUR2YLR226W 1188 nt4□□□□□ -1.77
TDP1P38319 YAR075WYAR075W 474 nt4□□□□□ -1.77
TDP1P38319 YLR428CYLR428C 345 nt4□□□□□ -1.77
TDP1P38319 YML031C-AYML031C-A 336 nt4□□□□□ -1.77
TDP1P38319 RGS2YOR107W 930 nt4□□□□□ -1.77
TDP1P38319 SUC2YIL162W 1599 nt4□□□□□ -1.77
TDP1P38319 UBP12YJL197W 3765 nt4□□□□□ -1.77
TDP1P38319 PHM7YOL084W 2976 nt4□□□□□ -1.77
TDP1P38319 YBL005W-AYBL005W-A 1323 nt3.99□□□□□ -1.77
TDP1P38319 SEC59YMR013C 1560 nt3.99□□□□□ -1.77
TDP1P38319 CWC2YDL209C 1020 nt3.99□□□□□ -1.77
TDP1P38319 SOP4YJL192C 705 nt3.99□□□□□ -1.77
TDP1P38319 YAR053WYAR053W 297 nt3.99□□□□□ -1.77
TDP1P38319 ASC1YMR116C 960 nt3.99□□□□□ -1.77
TDP1P38319 YNR021WYNR021W 1215 nt3.99□□□□□ -1.77
TDP1P38319 FSH3YOR280C 801 nt3.99□□□□□ -1.77
TDP1P38319 CUR1YPR158W 759 nt3.99□□□□□ -1.77
TDP1P38319 YBR242WYBR242W 717 nt3.99□□□□□ -1.77
TDP1P38319 POF1YCL047C 777 nt3.99□□□□□ -1.77
TDP1P38319 BUD27YFL023W 2391 nt3.99□□□□□ -1.77
TDP1P38319 NUP133YKR082W 3474 nt3.99□□□□□ -1.77
TDP1P38319 CUE3YGL110C 1875 nt3.98□□□□□ -1.77
TDP1P38319 ATG31YDR022C 591 nt3.98□□□□□ -1.77
TDP1P38319 COX13YGL191W 390 nt3.98□□□□□ -1.77
TDP1P38319 SPO13YHR014W 876 nt3.98□□□□□ -1.77
TDP1P38319 TPM2YIL138C 486 nt3.98□□□□□ -1.77
TDP1P38319 YLR171WYLR171W 390 nt3.98□□□□□ -1.77
TDP1P38319 SWC7YLR385C 399 nt3.98□□□□□ -1.77
TDP1P38319 SIW14YNL032W 846 nt3.98□□□□□ -1.77
TDP1P38319 RPS19AYOL121C 435 nt3.98□□□□□ -1.77
TDP1P38319 GCY1YOR120W 939 nt3.98□□□□□ -1.77
TDP1P38319 YOR379CYOR379C 339 nt3.98□□□□□ -1.77
TDP1P38319 YBR051WYBR051W 351 nt3.98□□□□□ -1.77
TDP1P38319 YPR016W-AYPR016W-A 261 nt3.98□□□□□ -1.77
TDP1P38319 YPR174CYPR174C 666 nt3.98□□□□□ -1.77
TDP1P38319 SEC66YBR171W 621 nt3.98□□□□□ -1.77
TDP1P38319 CTP1YBR291C 900 nt3.98□□□□□ -1.77
TDP1P38319 CTM1YHR109W 1758 nt3.98□□□□□ -1.77
TDP1P38319 MNL1YHR204W 2391 nt3.98□□□□□ -1.77
TDP1P38319 GRS2YPR081C 1857 nt3.98□□□□□ -1.77
TDP1P38319 YBR238CYBR238C 2196 nt3.97□□□□□ -1.77
TDP1P38319 RDH54YBR073W 2877 nt3.97□□□□□ -1.77
TDP1P38319 YPL109CYPL109C 1974 nt3.97□□□□□ -1.77
TDP1P38319 YDL163WYDL163W 303 nt3.97□□□□□ -1.77
TDP1P38319 RPS13YDR064W 456 nt3.97□□□□□ -1.77
TDP1P38319 TVP15YDR100W 432 nt3.97□□□□□ -1.77
TDP1P38319 YDR269CYDR269C 324 nt3.97□□□□□ -1.77
TDP1P38319 YDR320W-BYDR320W-B 138 nt3.97□□□□□ -1.77
TDP1P38319 PUG1YER185W 912 nt3.97□□□□□ -1.77
TDP1P38319 RPS25AYGR027C 327 nt3.97□□□□□ -1.77
TDP1P38319 PXR1YGR280C 816 nt3.97□□□□□ -1.77
TDP1P38319 ACF4YJR083C 930 nt3.97□□□□□ -1.77
TDP1P38319 ERP1YAR002C-A 660 nt3.97□□□□□ -1.77
TDP1P38319 ARC18YLR370C 537 nt3.97□□□□□ -1.77
TDP1P38319 YPL088WYPL088W 1029 nt3.97□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms