Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.28■□□□□ 0.52
CD40P25942 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.28■□□□□ 0.52
CD40P25942 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.28■□□□□ 0.52
CD40P25942 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD40P25942 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.28■□□□□ 0.52
CD40P25942 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD40P25942 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD40P25942 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD40P25942 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD40P25942 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.27■□□□□ 0.52
CD40P25942 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CD40P25942 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD40P25942 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.27■□□□□ 0.52
CD40P25942 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.27■□□□□ 0.52
CD40P25942 AC242852.2-201ENST00000615738 1807 ntBASIC18.27■□□□□ 0.52
CD40P25942 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD40P25942 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD40P25942 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD40P25942 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.27■□□□□ 0.51
CD40P25942 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CD40P25942 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD40P25942 FAM99A-202ENST00000538190 1989 ntBASIC18.26■□□□□ 0.51
CD40P25942 AC026471.6-201ENST00000622954 1905 ntBASIC18.26■□□□□ 0.51
CD40P25942 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CD40P25942 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.26■□□□□ 0.51
CD40P25942 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.26■□□□□ 0.51
CD40P25942 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CD40P25942 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.26■□□□□ 0.51
CD40P25942 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD40P25942 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.26■□□□□ 0.51
CD40P25942 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CD40P25942 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CD40P25942 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD40P25942 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.25■□□□□ 0.51
CD40P25942 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD40P25942 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD40P25942 AC233723.2-201ENST00000623798 2106 ntBASIC18.25■□□□□ 0.51
CD40P25942 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD40P25942 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD40P25942 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CD40P25942 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.25■□□□□ 0.51
CD40P25942 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.25■□□□□ 0.51
CD40P25942 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CD40P25942 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CD40P25942 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CD40P25942 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.25■□□□□ 0.51
CD40P25942 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CD40P25942 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CD40P25942 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.25■□□□□ 0.51
CD40P25942 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 AC068473.5-201ENST00000616428 2072 ntBASIC18.24■□□□□ 0.51
CD40P25942 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CD40P25942 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.24■□□□□ 0.51
CD40P25942 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.24■□□□□ 0.51
CD40P25942 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 NCF1B-203ENST00000435988 1254 ntBASIC18.24■□□□□ 0.51
CD40P25942 CNN2P6-201ENST00000439038 900 ntBASIC18.24■□□□□ 0.51
CD40P25942 TERF1P5-201ENST00000477545 1207 ntBASIC18.24■□□□□ 0.51
CD40P25942 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.24■□□□□ 0.51
CD40P25942 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.24■□□□□ 0.51
CD40P25942 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.24■□□□□ 0.51
CD40P25942 AC005181.1-201ENST00000604782 1256 ntBASIC18.24■□□□□ 0.51
CD40P25942 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.24■□□□□ 0.51
CD40P25942 GUSBP5-202ENST00000510805 1989 ntBASIC18.24■□□□□ 0.51
CD40P25942 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CD40P25942 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD40P25942 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.23■□□□□ 0.51
CD40P25942 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.23■□□□□ 0.51
CD40P25942 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.23■□□□□ 0.51
CD40P25942 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.23■□□□□ 0.51
CD40P25942 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.23■□□□□ 0.51
CD40P25942 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.23■□□□□ 0.51
CD40P25942 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CD40P25942 AC013268.1-206ENST00000638368 961 ntBASIC18.23■□□□□ 0.51
CD40P25942 AC112229.1-201ENST00000639295 961 ntBASIC18.23■□□□□ 0.51
CD40P25942 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 AC010542.4-201ENST00000563151 1910 ntBASIC18.23■□□□□ 0.51
CD40P25942 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 KRT16P2-201ENST00000414673 1423 ntBASIC18.23■□□□□ 0.51
CD40P25942 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD40P25942 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD40P25942 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
CD40P25942 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms