Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
APOA4P06727 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
APOA4P06727 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
APOA4P06727 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.15■□□□□ 0.98
APOA4P06727 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
APOA4P06727 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.15■□□□□ 0.98
APOA4P06727 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.15■□□□□ 0.98
APOA4P06727 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
APOA4P06727 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.15■□□□□ 0.98
APOA4P06727 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.15■□□□□ 0.98
APOA4P06727 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
APOA4P06727 AP004607.7-201ENST00000527152 1677 ntBASIC21.15■□□□□ 0.98
APOA4P06727 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.14■□□□□ 0.98
APOA4P06727 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
APOA4P06727 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
APOA4P06727 AC026471.6-201ENST00000622954 1905 ntBASIC21.14■□□□□ 0.98
APOA4P06727 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.14■□□□□ 0.97
APOA4P06727 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APOA4P06727 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
APOA4P06727 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
APOA4P06727 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.14■□□□□ 0.97
APOA4P06727 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.14■□□□□ 0.97
APOA4P06727 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.14■□□□□ 0.97
APOA4P06727 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
APOA4P06727 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
APOA4P06727 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APOA4P06727 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APOA4P06727 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.13■□□□□ 0.97
APOA4P06727 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.13■□□□□ 0.97
APOA4P06727 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APOA4P06727 IRS3P-201ENST00000223076 1006 ntBASIC21.13■□□□□ 0.97
APOA4P06727 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.13■□□□□ 0.97
APOA4P06727 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.13■□□□□ 0.97
APOA4P06727 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.13■□□□□ 0.97
APOA4P06727 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
APOA4P06727 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
APOA4P06727 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.12■□□□□ 0.97
APOA4P06727 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.12■□□□□ 0.97
APOA4P06727 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 AL354811.1-201ENST00000610286 706 ntBASIC21.12■□□□□ 0.97
APOA4P06727 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
APOA4P06727 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
APOA4P06727 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
APOA4P06727 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOA4P06727 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOA4P06727 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOA4P06727 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.11■□□□□ 0.97
APOA4P06727 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOA4P06727 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
APOA4P06727 AC012414.1-201ENST00000556676 535 ntBASIC21.11■□□□□ 0.97
APOA4P06727 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.11■□□□□ 0.97
APOA4P06727 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
APOA4P06727 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
APOA4P06727 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.1■□□□□ 0.97
APOA4P06727 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.1■□□□□ 0.97
APOA4P06727 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.1■□□□□ 0.97
APOA4P06727 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.1■□□□□ 0.97
APOA4P06727 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.1■□□□□ 0.97
APOA4P06727 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.1■□□□□ 0.97
APOA4P06727 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.1■□□□□ 0.97
APOA4P06727 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.1■□□□□ 0.97
APOA4P06727 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.1■□□□□ 0.97
APOA4P06727 AL358852.1-201ENST00000623174 1268 ntBASIC21.1■□□□□ 0.97
APOA4P06727 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.1■□□□□ 0.97
APOA4P06727 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
APOA4P06727 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
APOA4P06727 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.1■□□□□ 0.97
APOA4P06727 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.09■□□□□ 0.97
APOA4P06727 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.09■□□□□ 0.97
APOA4P06727 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.09■□□□□ 0.97
APOA4P06727 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APOA4P06727 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
APOA4P06727 AF106564.1-201ENST00000607058 2553 ntBASIC21.09■□□□□ 0.97
APOA4P06727 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
APOA4P06727 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
APOA4P06727 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.09■□□□□ 0.97
APOA4P06727 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.09■□□□□ 0.97
APOA4P06727 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
APOA4P06727 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms