Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
CNOT3O75175 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNOT3O75175 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
CNOT3O75175 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT3O75175 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNOT3O75175 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.4■□□□□ 0.86
CNOT3O75175 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.4■□□□□ 0.86
CNOT3O75175 ESRRAP2-201ENST00000418437 1549 ntBASIC20.4■□□□□ 0.86
CNOT3O75175 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNOT3O75175 AP004607.4-201ENST00000530158 1459 ntBASIC20.4■□□□□ 0.86
CNOT3O75175 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.4■□□□□ 0.86
CNOT3O75175 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.4■□□□□ 0.86
CNOT3O75175 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.4■□□□□ 0.86
CNOT3O75175 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.4■□□□□ 0.86
CNOT3O75175 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
CNOT3O75175 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CNOT3O75175 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT3O75175 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT3O75175 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.39■□□□□ 0.86
CNOT3O75175 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT3O75175 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNOT3O75175 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CNOT3O75175 AC004854.2-201ENST00000608450 1441 ntBASIC20.39■□□□□ 0.85
CNOT3O75175 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNOT3O75175 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.39■□□□□ 0.85
CNOT3O75175 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.39■□□□□ 0.85
CNOT3O75175 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.39■□□□□ 0.85
CNOT3O75175 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CNOT3O75175 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.39■□□□□ 0.85
CNOT3O75175 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNOT3O75175 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT3O75175 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT3O75175 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CNOT3O75175 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CNOT3O75175 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CNOT3O75175 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNOT3O75175 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.38■□□□□ 0.85
CNOT3O75175 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT3O75175 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT3O75175 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.38■□□□□ 0.85
CNOT3O75175 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.38■□□□□ 0.85
CNOT3O75175 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.38■□□□□ 0.85
CNOT3O75175 AC090192.1-201ENST00000517740 490 ntBASIC20.38■□□□□ 0.85
CNOT3O75175 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.38■□□□□ 0.85
CNOT3O75175 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CNOT3O75175 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CNOT3O75175 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNOT3O75175 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CNOT3O75175 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT3O75175 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CNOT3O75175 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT3O75175 AC073130.3-201ENST00000624389 2278 ntBASIC20.37■□□□□ 0.85
CNOT3O75175 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT3O75175 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CNOT3O75175 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT3O75175 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT3O75175 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.37■□□□□ 0.85
CNOT3O75175 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT3O75175 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.37■□□□□ 0.85
CNOT3O75175 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT3O75175 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT3O75175 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.37■□□□□ 0.85
CNOT3O75175 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT3O75175 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNOT3O75175 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT3O75175 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.36■□□□□ 0.85
CNOT3O75175 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT3O75175 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT3O75175 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.36■□□□□ 0.85
CNOT3O75175 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT3O75175 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.36■□□□□ 0.85
CNOT3O75175 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.36■□□□□ 0.85
CNOT3O75175 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.36■□□□□ 0.85
CNOT3O75175 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.36■□□□□ 0.85
CNOT3O75175 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT3O75175 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNOT3O75175 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.36■□□□□ 0.85
CNOT3O75175 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms