Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC137761.2-201ENST00000561729 223 ntBASIC26.34■■□□□ 1.81
SRGAP3O43295 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC26.34■■□□□ 1.81
SRGAP3O43295 AC145350.3-201ENST00000569033 163 ntBASIC26.34■■□□□ 1.81
SRGAP3O43295 AC092437.1-201ENST00000624794 1048 ntBASIC26.34■■□□□ 1.81
SRGAP3O43295 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 LINC00565-201ENST00000562710 2331 ntBASIC26.34■■□□□ 1.81
SRGAP3O43295 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SRGAP3O43295 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SRGAP3O43295 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SRGAP3O43295 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SRGAP3O43295 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.33■■□□□ 1.81
SRGAP3O43295 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.33■■□□□ 1.81
SRGAP3O43295 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SRGAP3O43295 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.33■■□□□ 1.81
SRGAP3O43295 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.33■■□□□ 1.8
SRGAP3O43295 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.33■■□□□ 1.8
SRGAP3O43295 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SRGAP3O43295 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.32■■□□□ 1.8
SRGAP3O43295 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.32■■□□□ 1.8
SRGAP3O43295 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.32■■□□□ 1.8
SRGAP3O43295 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.32■■□□□ 1.8
SRGAP3O43295 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.32■■□□□ 1.8
SRGAP3O43295 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SRGAP3O43295 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SRGAP3O43295 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SRGAP3O43295 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.32■■□□□ 1.8
SRGAP3O43295 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
SRGAP3O43295 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.31■■□□□ 1.8
SRGAP3O43295 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.31■■□□□ 1.8
SRGAP3O43295 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SRGAP3O43295 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.3■■□□□ 1.8
SRGAP3O43295 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SRGAP3O43295 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SRGAP3O43295 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.3■■□□□ 1.8
SRGAP3O43295 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.3■■□□□ 1.8
SRGAP3O43295 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.3■■□□□ 1.8
SRGAP3O43295 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SRGAP3O43295 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 AC006015.1-201ENST00000429970 570 ntBASIC26.29■■□□□ 1.8
SRGAP3O43295 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.29■■□□□ 1.8
SRGAP3O43295 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SRGAP3O43295 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SRGAP3O43295 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SRGAP3O43295 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.28■■□□□ 1.8
SRGAP3O43295 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SRGAP3O43295 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
SRGAP3O43295 BID-212ENST00000614949 1988 ntTSL 5 BASIC26.28■■□□□ 1.8
SRGAP3O43295 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SRGAP3O43295 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SRGAP3O43295 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP3O43295 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP3O43295 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.27■■□□□ 1.8
SRGAP3O43295 AC016769.1-201ENST00000409132 1010 ntBASIC26.27■■□□□ 1.8
SRGAP3O43295 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP3O43295 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP3O43295 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.27■■□□□ 1.8
SRGAP3O43295 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SRGAP3O43295 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.27■■□□□ 1.8
SRGAP3O43295 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms