Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cx3cl1O35188 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.41■□□□□ 0.38
Cx3cl1O35188 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cx3cl1O35188 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.4■□□□□ 0.38
Cx3cl1O35188 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.4■□□□□ 0.38
Cx3cl1O35188 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.4■□□□□ 0.38
Cx3cl1O35188 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cx3cl1O35188 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cx3cl1O35188 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cx3cl1O35188 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cl1O35188 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cl1O35188 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cx3cl1O35188 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cx3cl1O35188 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Cx3cl1O35188 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.37■□□□□ 0.37
Cx3cl1O35188 Gm12933-201ENSMUST00000120203 872 ntBASIC17.37■□□□□ 0.37
Cx3cl1O35188 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Gm6365-201ENSMUST00000054711 744 ntBASIC17.37■□□□□ 0.37
Cx3cl1O35188 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.37■□□□□ 0.37
Cx3cl1O35188 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cx3cl1O35188 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms