Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV1-2A0A0B4J238 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV1-2A0A0B4J238 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV1-2A0A0B4J238 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 PLK5-205ENST00000642079 1969 ntBASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV1-2A0A0B4J238 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 AC010141.3-201ENST00000456659 717 ntBASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV1-2A0A0B4J238 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 AL117332.1-201ENST00000622628 974 ntBASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV1-2A0A0B4J238 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 pRNA.6-201ENST00000610482 90 ntBASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 pRNA.5-201ENST00000612139 90 ntBASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 pRNA.11-201ENST00000618423 90 ntBASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 pRNA.13-201ENST00000619112 90 ntBASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV1-2A0A0B4J238 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms