Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ighv1-52A0A0A6YXC3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ighv1-52A0A0A6YXC3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 BC021767-201ENSMUST00000126387 1716 ntBASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm7290-201ENSMUST00000104990 617 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm12918-201ENSMUST00000120234 636 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm15710-201ENSMUST00000121821 636 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm37179-201ENSMUST00000194862 823 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm5075-201ENSMUST00000196916 622 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv1-52A0A0A6YXC3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms