Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav8-1A0A075B641 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav8-1A0A075B641 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav8-1A0A075B641 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav8-1A0A075B641 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8-1A0A075B641 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav8-1A0A075B641 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav8-1A0A075B641 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav8-1A0A075B641 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms