Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PIK3R5-209ENST00000581552 3253 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 ARHGAP30-203ENST00000368016 3482 ntTSL 5 BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 YME1L1-207ENST00000477432 3474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LMO3Q8TAP4 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 ZNF446-205ENST00000596341 3922 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 SRGAP2-AS1-202ENST00000437515 2504 ntTSL 2 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 PRAMEF31P-201ENST00000504262 1371 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 CDH4-201ENST00000543233 3117 ntTSL 2 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 PCDHGB4-201ENST00000519479 4578 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 ALAS1-205ENST00000484952 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 CACNB4-209ENST00000534999 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 FAM198B-202ENST00000393807 4544 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 KIAA1683-207ENST00000600359 3871 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 SNORA9B-201ENST00000384170 133 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 IGLV1-47-201ENST00000390294 407 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 TSEN15P3-201ENST00000422363 367 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 AC005324.1-201ENST00000434017 746 ntTSL 3 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 VN1R28P-201ENST00000452517 896 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 RN7SL734P-201ENST00000460858 298 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 THOC7-204ENST00000469584 836 ntTSL 2 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 LINC00499-202ENST00000507145 540 ntTSL 4 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 RACK1-226ENST00000511900 922 ntTSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 AC100810.2-201ENST00000517626 927 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 KHNYN-203ENST00000554268 760 ntTSL 3 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 LINC02169-201ENST00000561336 540 ntTSL 2 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 HKR1-222ENST00000591417 525 ntTSL 4 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 OR13I1P-201ENST00000609811 1264 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 FCGR2C-212ENST00000611236 958 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 MGLL-203ENST00000398104 4235 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 COPG2-202ENST00000425248 3134 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 DDR1-240ENST00000454612 3942 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 REN-201ENST00000272190 1447 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 CPEB4-203ENST00000517880 1416 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 TTC8-207ENST00000536576 2209 ntTSL 5 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 PGAP2-225ENST00000493547 1772 ntTSL 3 BASIC11.67□□□□□ -0.54
LMO3Q8TAP4 TUBG1P-201ENST00000418303 1358 ntBASIC11.67□□□□□ -0.54
LMO3Q8TAP4 TFAP2A-203ENST00000379613 3317 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 SIGLEC10-202ENST00000353836 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AL356488.3-201ENST00000608574 2888 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 TEX28-204ENST00000619903 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 FAM181A-AS1-202ENST00000554742 2402 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 KIF5A-201ENST00000286452 3527 ntTSL 2 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 GLOD5-201ENST00000303227 735 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 CBFA2T2-202ENST00000344201 1181 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ABRACL-201ENST00000367660 845 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 OR14J1-202ENST00000377160 1117 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 TAS2R40-201ENST00000408947 1043 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 IGKV3D-15-201ENST00000417279 396 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AC104777.2-201ENST00000421624 568 ntTSL 4 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ALMS1P1-201ENST00000428767 921 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 OR7E110P-201ENST00000431186 574 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AC013733.2-201ENST00000440371 635 ntTSL 2 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 FOLR2-203ENST00000449475 1242 ntTSL 3 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 MYL6P2-201ENST00000450079 434 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 FOLR2-204ENST00000454954 951 ntTSL 3 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ACA64.3-201ENST00000459613 127 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 MT1HL1-201ENST00000464121 316 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 LINC01033-201ENST00000504609 735 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AC145098.1-201ENST00000506025 434 ntTSL 3 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ANO1-AS2-201ENST00000531347 1004 ntTSL 2 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 CPT1A-204ENST00000538994 617 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AC010333.2-201ENST00000564505 698 ntTSL 3 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AP000350.5-201ENST00000609825 613 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 PAEP-209ENST00000611414 729 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 Metazoa_SRP.135-201ENST00000616324 269 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 AC008993.1-201ENST00000632280 776 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 HS6ST2-206ENST00000640529 831 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 LINC01345-203ENST00000635247 1646 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 MYO1F-222ENST00000613525 4296 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ST3GAL5-257ENST00000640418 2467 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 CES5A-204ENST00000520435 1948 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 HADHAP2-201ENST00000540341 2285 ntBASIC11.66□□□□□ -0.54
LMO3Q8TAP4 ZNF544-215ENST00000599953 2274 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 DCAF8-202ENST00000368073 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 BAP1-201ENST00000296288 3434 ntTSL 5 BASIC11.66□□□□□ -0.54
LMO3Q8TAP4 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LMO3Q8TAP4 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LMO3Q8TAP4 AL590438.1-201ENST00000607061 3461 ntBASIC11.65□□□□□ -0.54
LMO3Q8TAP4 AC104758.3-204ENST00000567226 1493 ntTSL 5 BASIC11.65□□□□□ -0.54
LMO3Q8TAP4 EIF1AD-204ENST00000526451 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms