Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NOTCH3Q9UM47 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.28■□□□□ 0.2
NOTCH3Q9UM47 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NOTCH3Q9UM47 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NOTCH3Q9UM47 ITM2C-210ENST00000620962 501 ntBASIC16.28■□□□□ 0.2
NOTCH3Q9UM47 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 SLC7A5P1-201ENST00000568957 537 ntBASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NOTCH3Q9UM47 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 AC083880.1-201ENST00000608266 535 ntBASIC16.27■□□□□ 0.19
NOTCH3Q9UM47 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 AC133041.1-202ENST00000642053 222 ntBASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.26■□□□□ 0.19
NOTCH3Q9UM47 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 AC010141.2-201ENST00000452426 721 ntBASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 HTR7P1-202ENST00000624664 4411 ntBASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 AC068338.2-201ENST00000563278 1430 ntBASIC16.25■□□□□ 0.19
NOTCH3Q9UM47 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 AC138907.5-202ENST00000569484 235 ntBASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH3Q9UM47 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 ANOS2P-203ENST00000472227 1816 ntBASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH3Q9UM47 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms