Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE7Q9UBL6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE7Q9UBL6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 DUX4L16-201ENST00000555130 1264 ntBASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE7Q9UBL6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 AC006970.2-201ENST00000450065 779 ntBASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 SLC7A5P2-201ENST00000553010 536 ntBASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 AC008175.2-201ENST00000612840 297 ntBASIC20.58■□□□□ 0.89
CPNE7Q9UBL6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.58■□□□□ 0.88
CPNE7Q9UBL6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE7Q9UBL6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE7Q9UBL6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.58■□□□□ 0.88
CPNE7Q9UBL6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE7Q9UBL6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 SLC7A5P1-201ENST00000568957 537 ntBASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 AC231657.2-201ENST00000624556 255 ntBASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 AC026471.6-201ENST00000622954 1905 ntBASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE7Q9UBL6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 AC242852.2-201ENST00000615738 1807 ntBASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 AC068473.5-201ENST00000616428 2072 ntBASIC20.56■□□□□ 0.88
CPNE7Q9UBL6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms