Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.76■□□□□ 0.43
KCNIP1Q9NZI2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KCNIP1Q9NZI2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 AC026471.6-201ENST00000622954 1905 ntBASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.74■□□□□ 0.43
KCNIP1Q9NZI2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 UNC93B3-201ENST00000308076 687 ntBASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 BX842568.3-201ENST00000418104 571 ntBASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 AC131212.1-201ENST00000613771 668 ntBASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNIP1Q9NZI2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNIP1Q9NZI2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNIP1Q9NZI2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms