Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 AC120498.10-201ENST00000621827 505 ntBASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RETREG1Q9H6L5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 AC244015.2-201ENST00000616358 1861 ntBASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 EP400NL-214ENST00000641289 2402 ntBASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RETREG1Q9H6L5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 KRT16P2-201ENST00000414673 1423 ntBASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 AC022517.1-201ENST00000592429 346 ntBASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RETREG1Q9H6L5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RETREG1Q9H6L5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 AC006015.1-201ENST00000429970 570 ntBASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RETREG1Q9H6L5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
RETREG1Q9H6L5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 AC137761.2-201ENST00000561729 223 ntBASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 AC145350.3-201ENST00000569033 163 ntBASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG1Q9H6L5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
RETREG1Q9H6L5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms