Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TpbpbQ9CQC0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TpbpbQ9CQC0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Grk6-206ENSMUST00000224995 2971 ntBASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TpbpbQ9CQC0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.64■□□□□ 0.26
TpbpbQ9CQC0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TpbpbQ9CQC0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TpbpbQ9CQC0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TpbpbQ9CQC0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TpbpbQ9CQC0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TpbpbQ9CQC0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TpbpbQ9CQC0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.61■□□□□ 0.25
TpbpbQ9CQC0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TpbpbQ9CQC0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms