Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gtf2ird2Q99NI3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gtf2ird2Q99NI3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gtf2ird2Q99NI3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Gm13148-201ENSMUST00000118892 745 ntBASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.13■□□□□ 0.65
Gtf2ird2Q99NI3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gtf2ird2Q99NI3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gtf2ird2Q99NI3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Gtf2ird2Q99NI3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gtf2ird2Q99NI3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gtf2ird2Q99NI3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Gtf2ird2Q99NI3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms