Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BARD1Q99728 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BARD1Q99728 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
BARD1Q99728 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BARD1Q99728 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.22■□□□□ 0.83
BARD1Q99728 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.22■□□□□ 0.83
BARD1Q99728 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.22■□□□□ 0.83
BARD1Q99728 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.22■□□□□ 0.83
BARD1Q99728 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BARD1Q99728 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
BARD1Q99728 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BARD1Q99728 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.21■□□□□ 0.83
BARD1Q99728 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.21■□□□□ 0.83
BARD1Q99728 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.21■□□□□ 0.83
BARD1Q99728 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.21■□□□□ 0.83
BARD1Q99728 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.21■□□□□ 0.83
BARD1Q99728 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
BARD1Q99728 LINC01960-201ENST00000563759 1884 ntBASIC20.21■□□□□ 0.83
BARD1Q99728 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
BARD1Q99728 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
BARD1Q99728 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BARD1Q99728 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.2■□□□□ 0.82
BARD1Q99728 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
BARD1Q99728 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
BARD1Q99728 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.2■□□□□ 0.82
BARD1Q99728 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
BARD1Q99728 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.2■□□□□ 0.82
BARD1Q99728 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.2■□□□□ 0.82
BARD1Q99728 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 FP325331.1-202ENST00000623531 1380 ntBASIC20.2■□□□□ 0.82
BARD1Q99728 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BARD1Q99728 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.19■□□□□ 0.82
BARD1Q99728 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 AC073130.3-201ENST00000624389 2278 ntBASIC20.19■□□□□ 0.82
BARD1Q99728 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
BARD1Q99728 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
BARD1Q99728 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 AP005435.1-201ENST00000529293 1178 ntBASIC20.19■□□□□ 0.82
BARD1Q99728 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.19■□□□□ 0.82
BARD1Q99728 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.19■□□□□ 0.82
BARD1Q99728 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.19■□□□□ 0.82
BARD1Q99728 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BARD1Q99728 LINC01529-204ENST00000636474 1715 ntBASIC20.19■□□□□ 0.82
BARD1Q99728 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.19■□□□□ 0.82
BARD1Q99728 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.18■□□□□ 0.82
BARD1Q99728 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.18■□□□□ 0.82
BARD1Q99728 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.18■□□□□ 0.82
BARD1Q99728 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.18■□□□□ 0.82
BARD1Q99728 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BARD1Q99728 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.18■□□□□ 0.82
BARD1Q99728 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BARD1Q99728 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BARD1Q99728 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
BARD1Q99728 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
BARD1Q99728 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.17■□□□□ 0.82
BARD1Q99728 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
BARD1Q99728 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BARD1Q99728 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
BARD1Q99728 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms