Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMP4Q99727 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP4Q99727 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.46■□□□□ 0.71
TIMP4Q99727 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMP4Q99727 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP4Q99727 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMP4Q99727 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TIMP4Q99727 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.46■□□□□ 0.71
TIMP4Q99727 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.46■□□□□ 0.71
TIMP4Q99727 AL137784.2-201ENST00000607332 1000 ntBASIC19.46■□□□□ 0.71
TIMP4Q99727 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP4Q99727 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
TIMP4Q99727 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP4Q99727 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP4Q99727 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMP4Q99727 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMP4Q99727 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMP4Q99727 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.45■□□□□ 0.7
TIMP4Q99727 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TIMP4Q99727 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP4Q99727 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.45■□□□□ 0.7
TIMP4Q99727 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP4Q99727 AC092437.1-201ENST00000624794 1048 ntBASIC19.45■□□□□ 0.7
TIMP4Q99727 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TIMP4Q99727 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP4Q99727 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP4Q99727 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TIMP4Q99727 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMP4Q99727 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMP4Q99727 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP4Q99727 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP4Q99727 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TIMP4Q99727 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP4Q99727 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TIMP4Q99727 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TIMP4Q99727 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.44■□□□□ 0.7
TIMP4Q99727 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.44■□□□□ 0.7
TIMP4Q99727 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP4Q99727 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.44■□□□□ 0.7
TIMP4Q99727 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.44■□□□□ 0.7
TIMP4Q99727 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.44■□□□□ 0.7
TIMP4Q99727 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.44■□□□□ 0.7
TIMP4Q99727 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TIMP4Q99727 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TIMP4Q99727 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
TIMP4Q99727 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TIMP4Q99727 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TIMP4Q99727 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 AC005229.4-201ENST00000610085 2198 ntBASIC19.43■□□□□ 0.7
TIMP4Q99727 AP004607.4-201ENST00000530158 1459 ntBASIC19.43■□□□□ 0.7
TIMP4Q99727 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.43■□□□□ 0.7
TIMP4Q99727 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.43■□□□□ 0.7
TIMP4Q99727 KRT18P61-201ENST00000585825 1298 ntBASIC19.43■□□□□ 0.7
TIMP4Q99727 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMP4Q99727 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMP4Q99727 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
TIMP4Q99727 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMP4Q99727 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMP4Q99727 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMP4Q99727 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMP4Q99727 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.42■□□□□ 0.7
TIMP4Q99727 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMP4Q99727 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP4Q99727 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.41■□□□□ 0.7
TIMP4Q99727 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TIMP4Q99727 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 AC005224.4-201ENST00000583262 1652 ntBASIC19.41■□□□□ 0.7
TIMP4Q99727 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TIMP4Q99727 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.41■□□□□ 0.7
TIMP4Q99727 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.41■□□□□ 0.7
TIMP4Q99727 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TIMP4Q99727 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms