Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
DDX11Q96FC9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX11Q96FC9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX11Q96FC9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX11Q96FC9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.14■■□□□ 1.62
DDX11Q96FC9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
DDX11Q96FC9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.14■■□□□ 1.62
DDX11Q96FC9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.14■■□□□ 1.62
DDX11Q96FC9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX11Q96FC9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.14■■□□□ 1.61
DDX11Q96FC9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX11Q96FC9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX11Q96FC9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.61
DDX11Q96FC9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
DDX11Q96FC9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.13■■□□□ 1.61
DDX11Q96FC9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
DDX11Q96FC9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX11Q96FC9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX11Q96FC9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.12■■□□□ 1.61
DDX11Q96FC9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX11Q96FC9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX11Q96FC9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.12■■□□□ 1.61
DDX11Q96FC9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX11Q96FC9 OXCT2P1-201ENST00000447263 1535 ntBASIC25.12■■□□□ 1.61
DDX11Q96FC9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
DDX11Q96FC9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX11Q96FC9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX11Q96FC9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
DDX11Q96FC9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX11Q96FC9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.11■■□□□ 1.61
DDX11Q96FC9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX11Q96FC9 TPRG1LP1-201ENST00000598702 760 ntBASIC25.11■■□□□ 1.61
DDX11Q96FC9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX11Q96FC9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX11Q96FC9 BX005040.4-201ENST00000637145 1518 ntBASIC25.11■■□□□ 1.61
DDX11Q96FC9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX11Q96FC9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
DDX11Q96FC9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX11Q96FC9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX11Q96FC9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX11Q96FC9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX11Q96FC9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX11Q96FC9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
DDX11Q96FC9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX11Q96FC9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
DDX11Q96FC9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC25.08■■□□□ 1.61
DDX11Q96FC9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
DDX11Q96FC9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX11Q96FC9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX11Q96FC9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms