Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 AC010141.3-201ENST00000456659 717 ntBASIC20.31■□□□□ 0.84
VPS33AQ96AX1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 AL356740.2-201ENST00000601559 647 ntBASIC20.31■□□□□ 0.84
VPS33AQ96AX1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 AC087239.1-201ENST00000622671 572 ntBASIC20.31■□□□□ 0.84
VPS33AQ96AX1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS33AQ96AX1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS33AQ96AX1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 AL035685.1-201ENST00000636663 812 ntBASIC20.29■□□□□ 0.84
VPS33AQ96AX1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS33AQ96AX1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.28■□□□□ 0.84
VPS33AQ96AX1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 LINC01521-201ENST00000504184 1943 ntBASIC20.28■□□□□ 0.84
VPS33AQ96AX1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 MIR3621-201ENST00000580529 85 ntBASIC20.28■□□□□ 0.84
VPS33AQ96AX1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 AC003102.1-202ENST00000563394 1796 ntBASIC20.28■□□□□ 0.84
VPS33AQ96AX1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VPS33AQ96AX1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.27■□□□□ 0.84
VPS33AQ96AX1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms