Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.59■□□□□ 0.57
DNAAF1Q8NEP3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DNAAF1Q8NEP3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
DNAAF1Q8NEP3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 AC079089.2-201ENST00000531211 1277 ntBASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 MIR3181-201ENST00000578512 73 ntBASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DNAAF1Q8NEP3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 OR2I1P-207ENST00000453522 948 ntBASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DNAAF1Q8NEP3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 LINC01521-201ENST00000504184 1943 ntBASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 AL512631.2-201ENST00000604634 923 ntBASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 OR7E47P-201ENST00000546390 1422 ntBASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNAAF1Q8NEP3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNAAF1Q8NEP3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms