Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 AL031432.3-201ENST00000607698 485 ntBASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 AL355001.2-201ENST00000620617 1191 ntBASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZNF439Q8NDP4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 MIR939-201ENST00000401314 82 ntBASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ZNF439Q8NDP4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF439Q8NDP4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ZNF439Q8NDP4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.52■□□□□ 0.39
ZNF439Q8NDP4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ZNF439Q8NDP4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF439Q8NDP4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ZNF439Q8NDP4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF439Q8NDP4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 AF213884.3-201ENST00000563833 479 ntBASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 AC007375.3-201ENST00000600936 2314 ntBASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 RASA4CP-201ENST00000424092 1398 ntBASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF439Q8NDP4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 TSPY26P-201ENST00000476365 1326 ntBASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 AL139246.5-201ENST00000606645 996 ntBASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 AL136967.2-201ENST00000623968 743 ntBASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF439Q8NDP4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 AC091305.1-201ENST00000479476 895 ntBASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF439Q8NDP4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms