Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.27■□□□□ 0.84
Depdc1bQ8BH88 BC021767-201ENSMUST00000126387 1716 ntBASIC20.27■□□□□ 0.83
Depdc1bQ8BH88 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.26■□□□□ 0.83
Depdc1bQ8BH88 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Gm13234-201ENSMUST00000120010 747 ntBASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Gm7860-201ENSMUST00000121190 879 ntBASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.25■□□□□ 0.83
Depdc1bQ8BH88 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
Depdc1bQ8BH88 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Depdc1bQ8BH88 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Depdc1bQ8BH88 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Reep4-203ENSMUST00000226563 1444 ntBASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms