Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
FAM78BQ5VT40 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
FAM78BQ5VT40 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 AC104564.3-201ENST00000582367 638 ntBASIC16.73■□□□□ 0.27
FAM78BQ5VT40 MTDHP2-201ENST00000601468 714 ntBASIC16.73■□□□□ 0.27
FAM78BQ5VT40 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 AC009102.2-201ENST00000606772 1639 ntBASIC16.73■□□□□ 0.27
FAM78BQ5VT40 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM78BQ5VT40 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.72■□□□□ 0.27
FAM78BQ5VT40 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 TSPY9P-201ENST00000440215 945 ntBASIC16.72■□□□□ 0.27
FAM78BQ5VT40 TSPY11P-201ENST00000442607 1045 ntBASIC16.72■□□□□ 0.27
FAM78BQ5VT40 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
FAM78BQ5VT40 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM78BQ5VT40 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FAM78BQ5VT40 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FAM78BQ5VT40 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms